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MS015534 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015534
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold300:375298..375453
RNA-Seq ExpressionMS015534
SyntenyMS015534
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN70431.1 hypothetical protein VITISV_030910 [Vitis vinifera]8.7e-0652.08Show/hide
Query:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
        + T DK+Q R       P WC LCK + ES+D+L LHCP++ GLWNKL
Subjt:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
CAN72548.1 hypothetical protein VITISV_035350, partial [Vitis vinifera]8.7e-0652.08Show/hide
Query:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
        + T DK+Q R       P WC LCK + ES+D+L LHCP++ GLWNKL
Subjt:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
RVW44143.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]8.7e-0652.08Show/hide
Query:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
        + T DK+Q R       P WC LCK + ES+D+L LHCP++ GLWNKL
Subjt:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
RVW56231.1 putative ribonuclease H protein [Vitis vinifera]8.7e-0652.08Show/hide
Query:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
        + T DK+Q R       P WC LCK + ES+D+L LHCP++ GLWNKL
Subjt:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
RVW73298.1 Histone-lysine N-methyltransferase SUVR5 [Vitis vinifera]8.7e-0652.08Show/hide
Query:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
        + T DK+Q R       P WC LCK + ES+D+L LHCP++ GLWNKL
Subjt:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
TrEMBL top hitse value%identityAlignment
A0A438E8V6 LINE-1 retrotransposable element ORF2 protein4.2e-0652.08Show/hide
Query:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
        + T DK+Q R       P WC LCK + ES+D+L LHCP++ GLWNKL
Subjt:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
A0A438F8D1 Putative ribonuclease H protein4.2e-0652.08Show/hide
Query:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
        + T DK+Q R       P WC LCK + ES+D+L LHCP++ GLWNKL
Subjt:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
A0A438GM94 Histone-lysine N-methyltransferase SUVR54.2e-0652.08Show/hide
Query:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
        + T DK+Q R       P WC LCK + ES+D+L LHCP++ GLWNKL
Subjt:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
A5BP42 zf-RVT domain-containing protein (Fragment)4.2e-0652.08Show/hide
Query:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
        + T DK+Q R       P WC LCK + ES+D+L LHCP++ GLWNKL
Subjt:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
A5BQI4 Reverse transcriptase domain-containing protein4.2e-0652.08Show/hide
Query:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
        + T DK+Q R       P WC LCK + ES+D+L LHCP++ GLWNKL
Subjt:  ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTACTACCCAAGATAAAATTCAGAAGCGCCTTCGAAACGTCTACAGCAACCCCGGTTGGTGTTCTCTTTGCAAGTTAGATTTGGAGTCTCTGGATTACCTGCTCCTTCA
CTGCCCCCTTTCCACAGGCCTTTGGAATAAACTCTCCTCTGTTTTT
mRNA sequenceShow/hide mRNA sequence
ATTACTACCCAAGATAAAATTCAGAAGCGCCTTCGAAACGTCTACAGCAACCCCGGTTGGTGTTCTCTTTGCAAGTTAGATTTGGAGTCTCTGGATTACCTGCTCCTTCA
CTGCCCCCTTTCCACAGGCCTTTGGAATAAACTCTCCTCTGTTTTT
Protein sequenceShow/hide protein sequence
ITTQDKIQKRLRNVYSNPGWCSLCKLDLESLDYLLLHCPLSTGLWNKLSSVF