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MS015536 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015536
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor DIVARICATA-like
Genome locationscaffold300:382560..382763
RNA-Seq ExpressionMS015536
SyntenyMS015536
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010695074.1 PREDICTED: transcription factor DIVARICATA [Beta vulgaris subsp. vulgaris]6.4e-0955.88Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        RLFL+GLEKY  G+W+ I+   VVTRT TQVASHAQKY        + Q +GK  R +SSI +IT VD
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

XP_021856464.1 transcription factor DIVARICATA-like [Spinacia oleracea]6.4e-0955.88Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        RLFL+GLEKY  G+W+ I+   VVTRT TQVASHAQKY        + Q +GK  R +SSI +IT VD
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

XP_022145130.1 transcription factor DIVARICATA-like [Momordica charantia]3.6e-2897.01Show/hide
Query:  LFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        LFLMGLEKY NGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIF+ITAVD
Subjt:  LFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

XP_022145147.1 uncharacterized protein LOC111014661 [Momordica charantia]4.0e-1976.12Show/hide
Query:  LFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        LFL+G EKY  GNWKEI+T+  VT+TSTQV SHAQKY KY QNPN  QRNGKSC SKSSIF ITAVD
Subjt:  LFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

XP_039012789.1 transcription factor DIVARICATA-like [Hibiscus syriacus]6.4e-0955.88Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        RLFL+GL KY  G+W+ I+   VVTRTSTQVASHAQKY +        Q +GK  R +SSI +IT VD
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

TrEMBL top hitse value%identityAlignment
A0A0K9Q782 Uncharacterized protein3.1e-0955.88Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        RLFL+GLEKY  G+W+ I+   VVTRT TQVASHAQKY        + Q +GK  R +SSI +IT VD
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

A0A6A2ZN51 Transcription factor DIVARICATA3.1e-0955.88Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        RLFL+GL KY  G+W+ I+   VVTRTSTQVASHAQKY +        Q +GK  R +SSI +IT VD
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

A0A6J1CTL3 transcription factor DIVARICATA-like1.8e-2897.01Show/hide
Query:  LFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        LFLMGLEKY NGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIF+ITAVD
Subjt:  LFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

A0A6J1CVN6 uncharacterized protein LOC1110146611.9e-1976.12Show/hide
Query:  LFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        LFL+G EKY  GNWKEI+T+  VT+TSTQV SHAQKY KY QNPN  QRNGKSC SKSSIF ITAVD
Subjt:  LFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

A0A803N8C1 Uncharacterized protein3.1e-0955.88Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        RLFL+GLEKY  G+W+ I+   VVTRT TQVASHAQKY        + Q +GK  R +SSI +IT VD
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS18.7e-0947.76Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAV
        RLFL+GL+K+  G+W+ I+  FV++RT TQVASHAQKY     + N ++R       +SSI +IT+V
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAV

Q2V9B0 Transcription factor MYB1R13.9e-0950.77Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNIT
        +LFL+GL+K   G+W+ I+  FV TRT TQVASHAQKY  + +  N+N+R     R +SS+F+IT
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNIT

Q8LH59 Transcription factor MYBS18.7e-0947.76Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAV
        RLFL+GL+K+  G+W+ I+  FV++RT TQVASHAQKY     + N ++R       +SSI +IT+V
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAV

Q8S9H7 Transcription factor DIVARICATA3.5e-1050Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        +LFLMGL+KY  G+W+ I+  FV+TRT TQVASHAQKY        I Q +G   + ++SI +IT V+
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

Q9FNN6 Transcription factor SRM17.9e-1052.24Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAV
        RLFL+GL+KY  G+W+ I+  FVVTRT TQVASHAQKY     + N ++R       +SSI +IT+V
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAV

Arabidopsis top hitse value%identityAlignment
AT1G74840.1 Homeodomain-like superfamily protein1.6e-1050.77Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNIT
        +LFL+GL++   G+WK I+  FV TRTSTQVASHAQKY  + +  N+N+R     R +SS+F++T
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNIT

AT2G38090.1 Duplicated homeodomain-like superfamily protein8.7e-1254.41Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        R FLMGL+KY  G+W+ IA  FV TRT TQVASHAQKY        I Q NG   + +SSI +IT V+
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

AT5G04760.1 Duplicated homeodomain-like superfamily protein7.3e-1150Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        +LFL+GL++Y  G+W+ I+   VVTRT TQVASHAQKY        + Q + K  R +SSI +IT VD
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD

AT5G08520.1 Duplicated homeodomain-like superfamily protein5.6e-1152.24Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAV
        RLFL+GL+KY  G+W+ I+  FVVTRT TQVASHAQKY     + N ++R       +SSI +IT+V
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAV

AT5G58900.1 Homeodomain-like transcriptional regulator2.5e-1150Show/hide
Query:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD
        +LFLMGL+KY  G+W+ I+  FV+TRT TQVASHAQKY        I Q +G   + ++SI +IT V+
Subjt:  RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGCTGTTTTTGATGGGACTGGAGAAGTACAGAAATGGAAATTGGAAAGAAATTGCAACAGAATTTGTGGTTACAAGAACATCCACCCAGGTGGCCAGCCATGCCCAGAA
GTACTGCAAGTACCGCCAAAACCCTAATATAAACCAGCGAAATGGGAAGAGCTGCAGGTCCAAGTCAAGTATTTTCAACATCACGGCCGTAGAT
mRNA sequenceShow/hide mRNA sequence
AGGCTGTTTTTGATGGGACTGGAGAAGTACAGAAATGGAAATTGGAAAGAAATTGCAACAGAATTTGTGGTTACAAGAACATCCACCCAGGTGGCCAGCCATGCCCAGAA
GTACTGCAAGTACCGCCAAAACCCTAATATAAACCAGCGAAATGGGAAGAGCTGCAGGTCCAAGTCAAGTATTTTCAACATCACGGCCGTAGAT
Protein sequenceShow/hide protein sequence
RLFLMGLEKYRNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFNITAVD