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MS015538 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015538
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionB-box type zinc finger protein with CCT domain
Genome locationscaffold300:389030..389140
RNA-Seq ExpressionMS015538
SyntenyMS015538
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
O22800 Zinc finger protein CONSTANS-LIKE 144.2e-0562.16Show/hide
Query:  HYANLLFRKRVQSHIYYNCNFEPVSIRCSMDNVVLYQ
        H ANLL RK V+S I  NC+ EPVS+RC  DN+VL Q
Subjt:  HYANLLFRKRVQSHIYYNCNFEPVSIRCSMDNVVLYQ
Q9C7E8 Zinc finger protein CONSTANS-LIKE 157.1e-0559.46Show/hide
Query:  HYANLLFRKRVQSHIYYNCNFEPVSIRCSMDNVVLYQ
        H ANLL RK V+S I  NC  EPVS+RC  DN++L Q
Subjt:  HYANLLFRKRVQSHIYYNCNFEPVSIRCSMDNVVLYQ
Arabidopsis top hitse value%identityAlignment
AT1G28050.1 B-box type zinc finger protein with CCT domain5.0e-0659.46Show/hide
Query:  HYANLLFRKRVQSHIYYNCNFEPVSIRCSMDNVVLYQ
        H ANLL RK V+S I  NC  EPVS+RC  DN++L Q
Subjt:  HYANLLFRKRVQSHIYYNCNFEPVSIRCSMDNVVLYQ
AT2G33500.1 B-box type zinc finger protein with CCT domain3.0e-0662.16Show/hide
Query:  HYANLLFRKRVQSHIYYNCNFEPVSIRCSMDNVVLYQ
        H ANLL RK V+S I  NC+ EPVS+RC  DN+VL Q
Subjt:  HYANLLFRKRVQSHIYYNCNFEPVSIRCSMDNVVLYQ
AT2G33500.2 B-box type zinc finger protein with CCT domain3.0e-0662.16Show/hide
Query:  HYANLLFRKRVQSHIYYNCNFEPVSIRCSMDNVVLYQ
        H ANLL RK V+S I  NC+ EPVS+RC  DN+VL Q
Subjt:  HYANLLFRKRVQSHIYYNCNFEPVSIRCSMDNVVLYQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATTATGCGAATTTGCTCTTTCGAAAGCGTGTTCAGTCTCATATCTATTATAATTGTAACTTTGAGCCCGTTTCGATTCGATGTTCCATGGATAATGTGGTGCTCTATCA
G
mRNA sequenceShow/hide mRNA sequence
CATTATGCGAATTTGCTCTTTCGAAAGCGTGTTCAGTCTCATATCTATTATAATTGTAACTTTGAGCCCGTTTCGATTCGATGTTCCATGGATAATGTGGTGCTCTATCA
G
Protein sequenceShow/hide protein sequence
HYANLLFRKRVQSHIYYNCNFEPVSIRCSMDNVVLYQ