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MS015542 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015542
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor DIVARICATA-like
Genome locationscaffold300:405237..405440
RNA-Seq ExpressionMS015542
SyntenyMS015542
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017884 - SANT domain
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KMS97920.1 hypothetical protein BVRB_4g097390 [Beta vulgaris subsp. vulgaris]9.0e-1158.82Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        RLFL+GLEKYG G+W+ I+   VVTRT TQVASHAQKY        + Q +GK  R +SSI DIT VD
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

XP_010695074.1 PREDICTED: transcription factor DIVARICATA [Beta vulgaris subsp. vulgaris]9.0e-1158.82Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        RLFL+GLEKYG G+W+ I+   VVTRT TQVASHAQKY        + Q +GK  R +SSI DIT VD
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

XP_021856464.1 transcription factor DIVARICATA-like [Spinacia oleracea]9.0e-1158.82Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        RLFL+GLEKYG G+W+ I+   VVTRT TQVASHAQKY        + Q +GK  R +SSI DIT VD
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

XP_022145130.1 transcription factor DIVARICATA-like [Momordica charantia]6.6e-30100Show/hide
Query:  LFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        LFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
Subjt:  LFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

XP_022145147.1 uncharacterized protein LOC111014661 [Momordica charantia]3.6e-2077.61Show/hide
Query:  LFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        LFL+G EKYG GNWKEI+T+  VT+TSTQV SHAQKY KY QNPN  QRNGKSC SKSSIF ITAVD
Subjt:  LFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

TrEMBL top hitse value%identityAlignment
A0A0J8E475 Uncharacterized protein4.3e-1158.82Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        RLFL+GLEKYG G+W+ I+   VVTRT TQVASHAQKY        + Q +GK  R +SSI DIT VD
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

A0A0K9Q782 Uncharacterized protein4.3e-1158.82Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        RLFL+GLEKYG G+W+ I+   VVTRT TQVASHAQKY        + Q +GK  R +SSI DIT VD
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

A0A6J1CTL3 transcription factor DIVARICATA-like3.2e-30100Show/hide
Query:  LFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        LFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
Subjt:  LFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

A0A6J1CVN6 uncharacterized protein LOC1110146611.8e-2077.61Show/hide
Query:  LFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        LFL+G EKYG GNWKEI+T+  VT+TSTQV SHAQKY KY QNPN  QRNGKSC SKSSIF ITAVD
Subjt:  LFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

A0A803N8C1 Uncharacterized protein4.3e-1158.82Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        RLFL+GLEKYG G+W+ I+   VVTRT TQVASHAQKY        + Q +GK  R +SSI DIT VD
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS11.6e-1050.75Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAV
        RLFL+GL+K+G G+W+ I+  FV++RT TQVASHAQKY     + N ++R       +SSI DIT+V
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAV

Q2V9B0 Transcription factor MYB1R17.1e-1153.85Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDIT
        +LFL+GL+K G G+W+ I+  FV TRT TQVASHAQKY  + +  N+N+R     R +SS+FDIT
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDIT

Q8LH59 Transcription factor MYBS11.6e-1050.75Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAV
        RLFL+GL+K+G G+W+ I+  FV++RT TQVASHAQKY     + N ++R       +SSI DIT+V
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAV

Q8S9H7 Transcription factor DIVARICATA6.5e-1252.94Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        +LFLMGL+KYG G+W+ I+  FV+TRT TQVASHAQKY        I Q +G   + ++SI DIT V+
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

Q9FNN6 Transcription factor SRM11.4e-1155.22Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAV
        RLFL+GL+KYG G+W+ I+  FVVTRT TQVASHAQKY     + N ++R       +SSI DIT+V
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAV

Arabidopsis top hitse value%identityAlignment
AT1G74840.1 Homeodomain-like superfamily protein3.0e-1253.85Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDIT
        +LFL+GL++ G G+WK I+  FV TRTSTQVASHAQKY  + +  N+N+R     R +SS+FD+T
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDIT

AT2G38090.1 Duplicated homeodomain-like superfamily protein1.6e-1357.35Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        R FLMGL+KYG G+W+ IA  FV TRT TQVASHAQKY        I Q NG   + +SSI DIT V+
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

AT5G04760.1 Duplicated homeodomain-like superfamily protein1.3e-1252.94Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        +LFL+GL++YG G+W+ I+   VVTRT TQVASHAQKY        + Q + K  R +SSI DIT VD
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD

AT5G08520.1 Duplicated homeodomain-like superfamily protein1.0e-1255.22Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAV
        RLFL+GL+KYG G+W+ I+  FVVTRT TQVASHAQKY     + N ++R       +SSI DIT+V
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAV

AT5G58900.1 Homeodomain-like transcriptional regulator4.6e-1352.94Show/hide
Query:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD
        +LFLMGL+KYG G+W+ I+  FV+TRT TQVASHAQKY        I Q +G   + ++SI DIT V+
Subjt:  RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGCTATTTTTGATGGGACTGGAGAAGTACGGAAATGGAAATTGGAAAGAAATTGCAACAGAATTTGTGGTTACAAGAACATCCACCCAGGTGGCCAGCCATGCCCAGAA
GTACTGCAAGTACCGCCAAAACCCTAATATAAACCAGCGAAATGGGAAGAGCTGCAGGTCCAAGTCCAGTATTTTCGACATCACGGCCGTAGAT
mRNA sequenceShow/hide mRNA sequence
AGGCTATTTTTGATGGGACTGGAGAAGTACGGAAATGGAAATTGGAAAGAAATTGCAACAGAATTTGTGGTTACAAGAACATCCACCCAGGTGGCCAGCCATGCCCAGAA
GTACTGCAAGTACCGCCAAAACCCTAATATAAACCAGCGAAATGGGAAGAGCTGCAGGTCCAAGTCCAGTATTTTCGACATCACGGCCGTAGAT
Protein sequenceShow/hide protein sequence
RLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVD