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MS015544 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015544
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHomeodomain-like superfamily protein
Genome locationscaffold300:415823..416062
RNA-Seq ExpressionMS015544
SyntenyMS015544
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EPS58300.1 hypothetical protein M569_16517 [Genlisea aurea]5.1e-0546.77Show/hide
Query:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHH-------ENRRNRKTPTVH
        R F  GL+ YG GNWK+I+   V T+TH QV SHAQKYF  H        ++ + RK P++H
Subjt:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHH-------ENRRNRKTPTVH

PRP80246.1 hypothetical protein PROFUN_12185 [Planoprotostelium fungivorum]3.0e-0550Show/hide
Query:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKT
        F  GLK+YG GNWK+I  +VGT+T  Q+ SHAQKYF +  +  +++K+
Subjt:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKT

RDX72894.1 Transcription factor DIVARICATA, partial [Mucuna pruriens]5.1e-0553.85Show/hide
Query:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH
        F  GLKIYG GNWK+IA++V TRT IQV SHAQKY+ + + + + +K  ++H
Subjt:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH

TKY45598.1 Transcription factor DIVARICATA [Spatholobus suberectus]5.1e-0550.91Show/hide
Query:  RSFSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHH
        R F  GL+I+G G+WK IA+ V TRT  QV SHAQKYF  HH + + +K  ++H+
Subjt:  RSFSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHH

TKY56032.1 Transcription factor DIVARICATA [Spatholobus suberectus]5.1e-0550.91Show/hide
Query:  RSFSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHH
        R F  GL+I+G G+WK IA+ V TRT  QV SHAQKYF  HH + + +K  ++H+
Subjt:  RSFSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHH

TrEMBL top hitse value%identityAlignment
A0A151Z8A8 Phosphatidylinositol-44.2e-0539.73Show/hide
Query:  SFSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHHRRRRHSNDLQLPITITTTN
        +F  G+ +YG G+WK+I+++VGTRT  Q+ SHAQKY+ +  +  +N+K  ++H        DL LP  I  +N
Subjt:  SFSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHHRRRRHSNDLQLPITITTTN

A0A2P6N8F7 Uncharacterized protein1.4e-0550Show/hide
Query:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKT
        F  GLK+YG GNWK+I  +VGT+T  Q+ SHAQKYF +  +  +++K+
Subjt:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKT

A0A2P6NH67 HTH myb-type domain-containing protein4.2e-0547.92Show/hide
Query:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKT
        F  GL+I+G G WK+IA +VGT+T  Q+ SHAQKYF +  +  +N+++
Subjt:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKT

A0A371F3Q7 Transcription factor DIVARICATA (Fragment)2.5e-0553.85Show/hide
Query:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH
        F  GLKIYG GNWK+IA++V TRT IQV SHAQKY+ + + + + +K  ++H
Subjt:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH

A0A426Z987 Uncharacterized protein5.5e-0550.85Show/hide
Query:  RSFSMGLKIYGPGNWKQIAE-LVGTRTHIQVGSHAQKYFFK-HHENRRNRKTPTVHHRR
        R F MGL +YG G+WK IA+  V TRT  QV SHAQKYF +  HE +  ++ P++H  R
Subjt:  RSFSMGLKIYGPGNWKQIAE-LVGTRTHIQVGSHAQKYFFK-HHENRRNRKTPTVHHRR

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS12.0e-0441.82Show/hide
Query:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH
        R F +GL  +G G+W+ I+   V +RT  QV SHAQKYF + +   R+R+  ++H
Subjt:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH

Q869R9 Myb-like protein J9.6e-0745.83Show/hide
Query:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKT
        F  G++I+G G WK+IA+ VGTRT  Q+ SHAQKY+ +  +  +N+++
Subjt:  FSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKT

Q8LH59 Transcription factor MYBS12.0e-0441.82Show/hide
Query:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH
        R F +GL  +G G+W+ I+   V +RT  QV SHAQKYF + +   R+R+  ++H
Subjt:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH

Q8S9H7 Transcription factor DIVARICATA4.0e-0540.91Show/hide
Query:  FSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHHRRRRHSNDLQLP
        F MGLK YG G+W+ I+   V TRT  QV SHAQKYF +     ++++  ++H     + +D Q P
Subjt:  FSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHHRRRRHSNDLQLP

Q9FNN6 Transcription factor SRM11.2e-0438.24Show/hide
Query:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHHRRRRHSNDLQLP
        R F +GL  YG G+W+ I+   V TRT  QV SHAQKYF + +   ++R+  ++H      + D+  P
Subjt:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHHRRRRHSNDLQLP

Arabidopsis top hitse value%identityAlignment
AT2G38090.1 Duplicated homeodomain-like superfamily protein1.5e-0747.27Show/hide
Query:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH
        R F MGLK YG G+W+ IA   V TRT  QV SHAQKYF +     ++++  ++H
Subjt:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH

AT4G09450.1 Duplicated homeodomain-like superfamily protein1.7e-0645.45Show/hide
Query:  RSFSMGLKIYGPGNWKQIAE-LVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH
        R F  GL  +G G+WK I+   V +RT  QV SHAQKYF +  +   N K P++H
Subjt:  RSFSMGLKIYGPGNWKQIAE-LVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH

AT5G01200.1 Duplicated homeodomain-like superfamily protein1.3e-0639.73Show/hide
Query:  FSMGLKIYGPGNWKQIAE-LVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHHRRRRHSNDLQLPITITTTN
        F MGLK YG G+W+ IA+  V TRT  QV SHAQKYF +   + ++++  ++H     +  D     T TT +
Subjt:  FSMGLKIYGPGNWKQIAE-LVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHHRRRRHSNDLQLPITITTTN

AT5G04760.1 Duplicated homeodomain-like superfamily protein2.6e-0747.17Show/hide
Query:  FSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH
        F +GLK YG G+W+ I+  +V TRT  QV SHAQKYF + +  ++ RK  ++H
Subjt:  FSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVH

AT5G23650.1 Homeodomain-like transcriptional regulator1.7e-0640.51Show/hide
Query:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHH---RRRRHSNDLQLPITITTTNS
        R F  GLK YG G+W+ I+   V TRT  QV SHAQKYF   +   + RK P++H       +  +  Q PIT    N+
Subjt:  RSFSMGLKIYGPGNWKQIA-ELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHH---RRRRHSNDLQLPITITTTNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGTCATTTTCTATGGGACTGAAGATTTATGGACCAGGGAACTGGAAACAGATTGCGGAATTGGTGGGCACAAGAACACACATCCAGGTGGGCAGCCATGCCCAAAAGTA
CTTCTTCAAGCACCATGAAAACCGGCGAAATCGGAAGACTCCCACTGTTCATCACCGCCGTCGCCGCCACAGCAACGATTTACAATTACCAATTACCATTACCACTACCA
ACTCTCTCACTTTCATTCAA
mRNA sequenceShow/hide mRNA sequence
AGGTCATTTTCTATGGGACTGAAGATTTATGGACCAGGGAACTGGAAACAGATTGCGGAATTGGTGGGCACAAGAACACACATCCAGGTGGGCAGCCATGCCCAAAAGTA
CTTCTTCAAGCACCATGAAAACCGGCGAAATCGGAAGACTCCCACTGTTCATCACCGCCGTCGCCGCCACAGCAACGATTTACAATTACCAATTACCATTACCACTACCA
ACTCTCTCACTTTCATTCAA
Protein sequenceShow/hide protein sequence
RSFSMGLKIYGPGNWKQIAELVGTRTHIQVGSHAQKYFFKHHENRRNRKTPTVHHRRRRHSNDLQLPITITTTNSLTFIQ