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MS015553 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015553
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMyb_DNA-bind_3 domain-containing protein
Genome locationscaffold627:67147..67461
RNA-Seq ExpressionMS015553
SyntenyMS015553
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1825870.1 unnamed protein product [Ananas comosus var. bracteatus]7.3e-2854.37Show/hide
Query:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY
        W+K +D+KL+E CLL+L+N G W+ D+ TF++ +L Q+E+WM +KIP+C+LK  PH++SR K+ K+ YNAI +MLG S SGFGW+++NKC+E  K+V+D 
Subjt:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY

Query:  WVK
        WVK
Subjt:  WVK
CAD1829438.1 unnamed protein product [Ananas comosus var. bracteatus]2.5e-2855.34Show/hide
Query:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY
        W+K +D+KL+E CLL+L+N G W+VD+ TF++ +L Q+E+WM +KIP+C+LK  PH++SR K+ K+ YNAI +MLG S SGFGW+++NKC+E  K+V+D 
Subjt:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY

Query:  WVK
        WVK
Subjt:  WVK
XP_020101014.1 uncharacterized protein LOC109718933 isoform X1 [Ananas comosus]7.3e-2854.37Show/hide
Query:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY
        W+K +D+KL+E CLL+L+N G W+ D+ TF++ +L Q+E+WM +KIP+C+LK  PH++SR K+ K+ YNAI +MLG S SGFGW+++NKC+E  K+V+D 
Subjt:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY

Query:  WVK
        WVK
Subjt:  WVK
XP_020101017.1 uncharacterized protein LOC109718933 isoform X2 [Ananas comosus]7.3e-2854.37Show/hide
Query:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY
        W+K +D+KL+E CLL+L+N G W+ D+ TF++ +L Q+E+WM +KIP+C+LK  PH++SR K+ K+ YNAI +MLG S SGFGW+++NKC+E  K+V+D 
Subjt:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY

Query:  WVK
        WVK
Subjt:  WVK
XP_024022021.1 uncharacterized protein LOC112091787 [Morus notabilis]4.7e-2759.22Show/hide
Query:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY
        W+  +D KLVE CLL++AN G WK D+ TFK  +L Q+EK M++KIP C LKA PH+ SRVKILKK Y+AI++MLG + SGFGWN+++KC+   K VFD 
Subjt:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY

Query:  WVK
        WVK
Subjt:  WVK
TrEMBL top hitse value%identityAlignment
A0A6P5FXE5 uncharacterized protein LOC109718933 isoform X13.5e-2854.37Show/hide
Query:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY
        W+K +D+KL+E CLL+L+N G W+ D+ TF++ +L Q+E+WM +KIP+C+LK  PH++SR K+ K+ YNAI +MLG S SGFGW+++NKC+E  K+V+D 
Subjt:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY

Query:  WVK
        WVK
Subjt:  WVK
A0A6P5G5H8 uncharacterized protein LOC109718933 isoform X23.5e-2854.37Show/hide
Query:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY
        W+K +D+KL+E CLL+L+N G W+ D+ TF++ +L Q+E+WM +KIP+C+LK  PH++SR K+ K+ YNAI +MLG S SGFGW+++NKC+E  K+V+D 
Subjt:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY

Query:  WVK
        WVK
Subjt:  WVK
A0A6V7P4Z9 Myb_DNA-bind_3 domain-containing protein3.5e-2854.37Show/hide
Query:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY
        W+K +D+KL+E CLL+L+N G W+ D+ TF++ +L Q+E+WM +KIP+C+LK  PH++SR K+ K+ YNAI +MLG S SGFGW+++NKC+E  K+V+D 
Subjt:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY

Query:  WVK
        WVK
Subjt:  WVK
A0A6V7PFT9 Myb_DNA-bind_3 domain-containing protein1.2e-2855.34Show/hide
Query:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY
        W+K +D+KL+E CLL+L+N G W+VD+ TF++ +L Q+E+WM +KIP+C+LK  PH++SR K+ K+ YNAI +MLG S SGFGW+++NKC+E  K+V+D 
Subjt:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY

Query:  WVK
        WVK
Subjt:  WVK
A0A6V7QY21 Myb_DNA-bind_3 domain-containing protein1.6e-2854.29Show/hide
Query:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY
        W+K +D+KL+E CLL+L+N G W+ D+ TF++ +L Q+E+WM +KIP+C+LK  PH++SR K+ K+ YNAI +MLG S SGFGW+++NKC+E  K+V+D 
Subjt:  WSKTKDDKLVEYCLLELANIGTWKVDS-TFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDY

Query:  WVKVS
        WVK S
Subjt:  WVKVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAGTAAGACAAAGGATGATAAGTTAGTGGAGTACTGTTTATTGGAGTTAGCTAATATTGGCACTTGGAAAGTTGATAGCACTTTCAAATCAAGATTTCTTATTCA
AATAGAAAAATGGATGTCTCAAAAAATTCCTAATTGCGATCTGAAAGCTACACCCCACATGAAGTCTAGAGTTAAAATATTGAAGAAGTATTATAATGCAATAGCTAAAA
TGTTAGGCTCAAGTTGTAGCGGTTTTGGATGGAATGAAAGAAACAAGTGCATTGAAGCAAGAAAACATGTATTCGATTATTGGGTAAAGGTAAGT
mRNA sequenceShow/hide mRNA sequence
ATGTGGAGTAAGACAAAGGATGATAAGTTAGTGGAGTACTGTTTATTGGAGTTAGCTAATATTGGCACTTGGAAAGTTGATAGCACTTTCAAATCAAGATTTCTTATTCA
AATAGAAAAATGGATGTCTCAAAAAATTCCTAATTGCGATCTGAAAGCTACACCCCACATGAAGTCTAGAGTTAAAATATTGAAGAAGTATTATAATGCAATAGCTAAAA
TGTTAGGCTCAAGTTGTAGCGGTTTTGGATGGAATGAAAGAAACAAGTGCATTGAAGCAAGAAAACATGTATTCGATTATTGGGTAAAGGTAAGT
Protein sequenceShow/hide protein sequence
MWSKTKDDKLVEYCLLELANIGTWKVDSTFKSRFLIQIEKWMSQKIPNCDLKATPHMKSRVKILKKYYNAIAKMLGSSCSGFGWNERNKCIEARKHVFDYWVKVS