CuGenDBv2

Gene ID	MS015575
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP synthase subunit alpha, chloroplastic
Genome location	scaffold627:332118..332261
RNA-Seq Expression	MS015575
Synteny	MS015575
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

AGW04426.1 ATP synthase CF1 alpha subunit [Astephanus triflorus]

1.6e-14

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

KAF1862802.1 hypothetical protein Lal_00040070 [Lupinus albus]

7.2e-15

91.67

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        A ESWLIE PAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

YP_009114434.1 ATP synthase CF1 alpha subunit [Paeonia obovata]

1.6e-14

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

YP_009369734.1 ATP synthase CF1 alpha subunit [Maackia floribunda]

1.6e-14

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

YP_009450042.1 ATP synthase CF1 alpha subunit [Burmannia cryptopetala]

1.2e-14

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

TrEMBL top hits

e value

%identity

Alignment

A0A1P8J735 ATP synthase subunit alpha, chloroplastic

7.8e-15

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

A0A2H4EBX2 ATP synthase subunit alpha, chloroplastic

6.0e-15

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

A0A6A5LVX1 ATP synthase subunit alpha

3.5e-15

91.67

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        A ESWLIE PAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

A0A6H0N1I1 ATP synthase subunit alpha, chloroplastic

7.8e-15

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

B7T2P2 ATP synthase subunit alpha, chloroplastic

7.8e-15

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

SwissProt top hits

e value

%identity

Alignment

A4QJA0 ATP synthase subunit alpha, chloroplastic

2.1e-17

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

A4QJI4 ATP synthase subunit alpha, chloroplastic

2.1e-17

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

A4QK03 ATP synthase subunit alpha, chloroplastic

2.1e-17

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

A4QK90 ATP synthase subunit alpha, chloroplastic

2.1e-17

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

P56757 ATP synthase subunit alpha, chloroplastic

2.1e-17

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

3.0e-11

64.29

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Query:  IESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        +E  APGI+ R+SV+EP+QTG  A+DS++PI RGQREL+IGD
Subjt:  IESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

ATCG00120.1 ATP synthase subunit alpha

1.5e-18

93.75

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Query:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD
        ASES LIESPAPGIISRRSVYEPLQTG IAIDSMIPI RGQRELIIGD
Subjt:  ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

ATMG01190.1 ATP synthase subunit 1

1.5e-10

63.41

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Query:  IESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIG
        +E  APGI+ R+SV+EP+QTG  A+DS++PI RGQREL+IG
Subjt:  IESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIG

Sequences

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CDS sequence

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GCTTCTGAATCTTGGTTAATTGAATCCCCCGCTCCTGGTATTATTTCGAGACGTTCCGTATATGAGCCCCTTCAAACAGGATTTATTGCTATTGATTCGATGATTCCTAT
CAGACGTGGTCAGCGAGAATTAATTATTGGGGAC

mRNA sequence

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GCTTCTGAATCTTGGTTAATTGAATCCCCCGCTCCTGGTATTATTTCGAGACGTTCCGTATATGAGCCCCTTCAAACAGGATTTATTGCTATTGATTCGATGATTCCTAT
CAGACGTGGTCAGCGAGAATTAATTATTGGGGAC

Protein sequence

Show/hide protein sequence

ASESWLIESPAPGIISRRSVYEPLQTGFIAIDSMIPIRRGQRELIIGD

MS015575 (gene) of Bitter gourd (TR) v1 genome