; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015577 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015577
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear transcription factor Y subunit C
Genome locationscaffold627:385004..385801
RNA-Seq ExpressionMS015577
SyntenyMS015577
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136852.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus]1.3e-13496.23Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQQPRP MPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSD

XP_022157652.1 nuclear transcription factor Y subunit C-2 [Momordica charantia]2.3e-142100Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSDA
        SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSDA
Subjt:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSDA

XP_022927856.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata]7.6e-13093.31Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQLPYSNPY+T  M ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHT---QPQQQQQTQQQSDA
        SPADLPYYYVP QHPV+A GMIMGKQLDQANMYG TAQQPRPP+PFMPWPHT   Q QQQQQTQQQSDA
Subjt:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHT---QPQQQQQTQQQSDA

XP_022988890.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima]2.6e-13093.68Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQLPYSNPY+T  M ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHT---QPQQQQQTQQQSDA
        SPADLPYYYVP QHPV+A GMIMGKQLDQANMYG TAQQPRPP+PFMPWPHT   Q QQQQQTQQQSDA
Subjt:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHT---QPQQQQQTQQQSDA

XP_038888434.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida]2.7e-13596.24Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQH QQSQQPAG VGAGQLPYSNPY+T  MVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSDA
        SPADLPYYYVP QHPV A GMIMGKQLDQ NMYGGTAQQPRP MPFMPWPHTQPQQQQQTQQQSDA
Subjt:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSDA

TrEMBL top hitse value%identityAlignment
A0A0A0K5U1 Histone domain-containing protein6.4e-13596.23Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQQPRP MPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSD

A0A1S3C190 nuclear transcription factor Y subunit C-26.4e-13596.23Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQQPRP MPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSD

A0A5A7SLP2 Nuclear transcription factor Y subunit C-26.4e-13596.23Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQQPRP MPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSD

A0A6J1DV19 nuclear transcription factor Y subunit C-21.1e-142100Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSDA
        SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSDA
Subjt:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSDA

A0A6J1JII4 nuclear transcription factor Y subunit C-2-like1.3e-13093.68Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQLPYSNPY+T  M ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHT---QPQQQQQTQQQSDA
        SPADLPYYYVP QHPV+A GMIMGKQLDQANMYG TAQQPRPP+PFMPWPHT   Q QQQQQTQQQSDA
Subjt:  SPADLPYYYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHT---QPQQQQQTQQQSDA

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-41.7e-6359.85Show/hide
Query:  QPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QPA GV AG       Y     V +  PA+    +QP  SF  +P      HQL YQQAQ FH Q QQQQQ+QLQ FWA ++ +IEQTTDFKNHSLPLAR
Subjt:  QPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LPY
        IKKIMKADEDVRMISAEAPVIFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ +A +P +G PAD  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LPY

Query:  YYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQ-QTQQQSD
         Y  PQ  V   G+           YGG  QQ  P      W   Q QQ++   +QQSD
Subjt:  YYVPPQHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQ-QTQQQSD

Q8L4B2 Nuclear transcription factor Y subunit C-91.2e-5655.81Show/hide
Query:  QQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPY+TN M    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY

Query:  YYVPP-QHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQS
         Y+P    P+  PGM+MG         GG      PP P+M  P  Q Q   Q  Q++
Subjt:  YYVPP-QHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQS

Q8LCG7 Nuclear transcription factor Y subunit C-27.2e-6769.63Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        M+QSE  Q QQQ          G + Y                  +PP    S   N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV
        NH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VV
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV

Query:  GSPADLPYYYVPPQ
        GSP   PYYY+  Q
Subjt:  GSPADLPYYYVPPQ

Q9SMP0 Nuclear transcription factor Y subunit C-17.8e-5361.2Show/hide
Query:  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELT
        A  IPP  P ++ S +    +Y       H   QQQQQQLQ+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT
Subjt:  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELT

Query:  LRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPPQHPVAAPGMIMGK
        +RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P    GM++G+
Subjt:  LRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPPQHPVAAPGMIMGK

Q9ZVL3 Nuclear transcription factor Y subunit C-33.7e-5555.24Show/hide
Query:  QQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK
        QQ Q  A   G      SNPY+TN M            T P  S   + HQ+        H QQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIK
Subjt:  QQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYV
        KIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG   A      + A  PY Y+
Subjt:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYV

Query:  PP-QHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQ
        PP   P+  PGM+MG            A  P P M    W    P+QQ
Subjt:  PP-QHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQ

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C98.2e-5855.81Show/hide
Query:  QQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPY+TN M    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY

Query:  YYVPP-QHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQS
         Y+P    P+  PGM+MG         GG      PP P+M  P  Q Q   Q  Q++
Subjt:  YYVPP-QHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQS

AT1G08970.3 nuclear factor Y, subunit C98.2e-5855.81Show/hide
Query:  QQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPY+TN M    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY

Query:  YYVPP-QHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQS
         Y+P    P+  PGM+MG         GG      PP P+M  P  Q Q   Q  Q++
Subjt:  YYVPP-QHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQS

AT1G08970.4 nuclear factor Y, subunit C98.2e-5855.81Show/hide
Query:  QQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPY+TN M    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY

Query:  YYVPP-QHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQS
         Y+P    P+  PGM+MG         GG      PP P+M  P  Q Q   Q  Q++
Subjt:  YYVPP-QHPVAAPGMIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQS

AT1G56170.1 nuclear factor Y, subunit C25.1e-6869.63Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        M+QSE  Q QQQ          G + Y                  +PP    S   N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV
        NH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VV
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV

Query:  GSPADLPYYYVPPQ
        GSP   PYYY+  Q
Subjt:  GSPADLPYYYVPPQ

AT1G56170.2 nuclear factor Y, subunit C25.1e-6869.63Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        M+QSE  Q QQQ          G + Y                  +PP    S   N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV
        NH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VV
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV

Query:  GSPADLPYYYVPPQ
        GSP   PYYY+  Q
Subjt:  GSPADLPYYYVPPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCACAGCAGCCTGCGGGGGGTGTCGGTGCAGGCCAATTACCATATTCTAATCCTTACGAAACAAATCTGATGGT
GGCTTCTGGAACGCCTGCTATCACGATTCCCCCGACTCAGCCCCCGTCGAGTTTCTCTAATTCTCCACACCAGCTCGCCTATCAGCAGGCTCAGCACTTCCACCACCAGC
AACAGCAGCAGCAGCAACAGCAGCTCCAGATGTTCTGGGCCAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCACAGTCTCCCCCTTGCCCGAATCAAG
AAAATAATGAAAGCGGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCGGTTATATTTGCAAAGGCGTGCGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGAT
CCATACAGAAGAGAATAAAAGGAGAACTCTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACCGATGTCTTCGATTTCTTGGTCGATATTATTCCTAGAGATGAAC
TGAAAGAGGAAGGACTCGGAATCACAAAAGCTTCTATTCCTGTAGTAGGTTCCCCTGCCGATCTTCCTTATTACTATGTCCCACCGCAGCATCCAGTGGCTGCACCTGGG
ATGATCATGGGAAAGCAATTAGATCAAGCAAATATGTACGGTGGCACCGCCCAACAGCCCCGACCACCGATGCCTTTCATGCCATGGCCACACACCCAACCTCAGCAGCA
GCAGCAAACCCAGCAGCAAAGTGATGCA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCACAGCAGCCTGCGGGGGGTGTCGGTGCAGGCCAATTACCATATTCTAATCCTTACGAAACAAATCTGATGGT
GGCTTCTGGAACGCCTGCTATCACGATTCCCCCGACTCAGCCCCCGTCGAGTTTCTCTAATTCTCCACACCAGCTCGCCTATCAGCAGGCTCAGCACTTCCACCACCAGC
AACAGCAGCAGCAGCAACAGCAGCTCCAGATGTTCTGGGCCAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCACAGTCTCCCCCTTGCCCGAATCAAG
AAAATAATGAAAGCGGATGAAGACGTCCGAATGATTTCAGCTGAAGCACCGGTTATATTTGCAAAGGCGTGCGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGAT
CCATACAGAAGAGAATAAAAGGAGAACTCTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACCGATGTCTTCGATTTCTTGGTCGATATTATTCCTAGAGATGAAC
TGAAAGAGGAAGGACTCGGAATCACAAAAGCTTCTATTCCTGTAGTAGGTTCCCCTGCCGATCTTCCTTATTACTATGTCCCACCGCAGCATCCAGTGGCTGCACCTGGG
ATGATCATGGGAAAGCAATTAGATCAAGCAAATATGTACGGTGGCACCGCCCAACAGCCCCGACCACCGATGCCTTTCATGCCATGGCCACACACCCAACCTCAGCAGCA
GCAGCAAACCCAGCAGCAAAGTGATGCA
Protein sequenceShow/hide protein sequence
MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYETNLMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK
KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPPQHPVAAPG
MIMGKQLDQANMYGGTAQQPRPPMPFMPWPHTQPQQQQQTQQQSDA