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MS015610 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015610
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPlant protein of unknown function (DUF639)
Genome locationscaffold444:57321..61500
RNA-Seq ExpressionMS015610
SyntenyMS015610
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156957.1 uncharacterized protein LOC111023786 isoform X1 [Momordica charantia]4.2e-7499.29Show/hide
Query:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG
        MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG
Subjt:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG

Query:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN
        AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSR N
Subjt:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN

XP_022963792.1 uncharacterized protein LOC111463987 [Cucurbita moschata]2.0e-5580.99Show/hide
Query:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTR-NIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPA
        MLCKLPST LK+S AGL+P ISHHG  RKFGCSTR N+PE K+RFK+VGLS GDKW L DIDANAVQQNLNKWLLKTQNFLNEVTSP GK SKNKDHIP 
Subjt:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTR-NIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPA

Query:  GAFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN
        GA  S +IE++VMAE+TVNI TPNGLLSSTAVVSIEQFSR N
Subjt:  GAFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN

XP_022967569.1 uncharacterized protein LOC111467032 [Cucurbita maxima]1.0e-5681.69Show/hide
Query:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTR-NIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPA
        MLCKLPST LK+S AGL+P ISHHG  RKFGCSTR N+PEPK+RFK+VGLS GDKW L DIDANAVQQNLNKWLLKTQNFLNEVTSP GK SKNKDHIP 
Subjt:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTR-NIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPA

Query:  GAFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN
        GA  S +IE++VMAE+TVNI TPNGLLSSTAVVSIEQFSR N
Subjt:  GAFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN

XP_038887911.1 uncharacterized protein LOC120077886 isoform X1 [Benincasa hispida]1.8e-6185.11Show/hide
Query:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG
        MLCKLPST+LK S AGL+P ISHHGDKRKFGC TRN+PEPK+RFKLVGLSMGDKW L DIDANAVQQNLNKWLLKTQNFLNEVTS  GKTSKNKDHIPAG
Subjt:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG

Query:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN
        A  + EIE+ VMAE+TVNI TPNGLLSSTAVVSIEQFSR N
Subjt:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN

XP_038887912.1 uncharacterized protein LOC120077886 isoform X2 [Benincasa hispida]1.8e-6185.11Show/hide
Query:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG
        MLCKLPST+LK S AGL+P ISHHGDKRKFGC TRN+PEPK+RFKLVGLSMGDKW L DIDANAVQQNLNKWLLKTQNFLNEVTS  GKTSKNKDHIPAG
Subjt:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG

Query:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN
        A  + EIE+ VMAE+TVNI TPNGLLSSTAVVSIEQFSR N
Subjt:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN

TrEMBL top hitse value%identityAlignment
A0A0A0LXY4 Uncharacterized protein4.7e-5577.24Show/hide
Query:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG
        ML KLPST+LK S AGL+P IS H DK  F C TRN+P+PK+RFKLVG+SMGDKW L DIDANAVQQNLNKWLLKTQNFLNEVTSP GKTSKNKDHIPA 
Subjt:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG

Query:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSNFYKI
        A+D+ E E+IV  E TVNI TPNGLLSS AVVSIEQFSRS++ KI
Subjt:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSNFYKI

A0A1S3B8Z7 uncharacterized protein LOC1034874773.7e-5277.3Show/hide
Query:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG
        ML KLPST+LK S AGL+P IS   DK  FGC TRN+PE K+RFKLVGLSMGDKW L DIDANAVQQNLNKWLLKTQNFLNEVTSP  KTSKNK+HIPAG
Subjt:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG

Query:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN
        A+ + E E+IV  E TVNI TPNGLLSS AVVSIEQFSR N
Subjt:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN

A0A6J1DTB7 uncharacterized protein LOC111023786 isoform X12.0e-7499.29Show/hide
Query:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG
        MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG
Subjt:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAG

Query:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN
        AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSR N
Subjt:  AFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN

A0A6J1HG64 uncharacterized protein LOC1114639879.5e-5680.99Show/hide
Query:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTR-NIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPA
        MLCKLPST LK+S AGL+P ISHHG  RKFGCSTR N+PE K+RFK+VGLS GDKW L DIDANAVQQNLNKWLLKTQNFLNEVTSP GK SKNKDHIP 
Subjt:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTR-NIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPA

Query:  GAFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN
        GA  S +IE++VMAE+TVNI TPNGLLSSTAVVSIEQFSR N
Subjt:  GAFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN

A0A6J1HX34 uncharacterized protein LOC1114670325.0e-5781.69Show/hide
Query:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTR-NIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPA
        MLCKLPST LK+S AGL+P ISHHG  RKFGCSTR N+PEPK+RFK+VGLS GDKW L DIDANAVQQNLNKWLLKTQNFLNEVTSP GK SKNKDHIP 
Subjt:  MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTR-NIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPA

Query:  GAFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN
        GA  S +IE++VMAE+TVNI TPNGLLSSTAVVSIEQFSR N
Subjt:  GAFDSIEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71240.1 Plant protein of unknown function (DUF639)5.2e-1437.31Show/hide
Query:  LKASPAGLEPPISHHGD----KRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIP-AGAFDS
        LK S A  + PI    D     R+   S       K R ++V      KW L DID N VQ+  ++W+ K+Q  L++VTSPL K S++   I      D 
Subjt:  LKASPAGLEPPISHHGD----KRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIP-AGAFDS

Query:  IEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFS
         ++E ++  E TV   TP G LS  A++SIEQFS
Subjt:  IEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFS

AT1G71240.2 Plant protein of unknown function (DUF639)3.6e-1537.96Show/hide
Query:  LKASPAGLEPPISHHGD----KRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIP-AGAFDS
        LK S A  + PI    D     R+   S       K R ++V      KW L DID N VQ+  ++W+ K+Q  L++VTSPL K S++   I      D 
Subjt:  LKASPAGLEPPISHHGD----KRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIP-AGAFDS

Query:  IEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN
         ++E ++  E TV   TP G LS  A++SIEQFSR N
Subjt:  IEIENIVMAEHTVNISTPNGLLSSTAVVSIEQFSRSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTGTAAACTCCCATCCACCTTCTTGAAAGCATCTCCTGCAGGATTGGAGCCTCCAATTTCTCACCATGGAGATAAACGCAAATTTGGGTGTTCCACTAGAAACAT
TCCTGAGCCGAAGTTTCGGTTTAAGCTCGTGGGACTCTCCATGGGAGATAAATGGCATCTTAAGGACATAGATGCGAATGCAGTGCAACAAAACCTAAACAAATGGCTGC
TAAAGACGCAGAACTTCTTAAACGAAGTCACGTCTCCCCTGGGAAAAACCAGTAAGAACAAAGATCACATTCCTGCAGGTGCCTTTGATTCTATCGAAATAGAGAATATA
GTAATGGCGGAACATACTGTTAATATCAGCACACCAAATGGCCTTCTCTCTTCTACTGCTGTTGTATCCATTGAGCAATTTAGCAGGTCAAATTTTTACAAAATT
mRNA sequenceShow/hide mRNA sequence
ATGCTCTGTAAACTCCCATCCACCTTCTTGAAAGCATCTCCTGCAGGATTGGAGCCTCCAATTTCTCACCATGGAGATAAACGCAAATTTGGGTGTTCCACTAGAAACAT
TCCTGAGCCGAAGTTTCGGTTTAAGCTCGTGGGACTCTCCATGGGAGATAAATGGCATCTTAAGGACATAGATGCGAATGCAGTGCAACAAAACCTAAACAAATGGCTGC
TAAAGACGCAGAACTTCTTAAACGAAGTCACGTCTCCCCTGGGAAAAACCAGTAAGAACAAAGATCACATTCCTGCAGGTGCCTTTGATTCTATCGAAATAGAGAATATA
GTAATGGCGGAACATACTGTTAATATCAGCACACCAAATGGCCTTCTCTCTTCTACTGCTGTTGTATCCATTGAGCAATTTAGCAGGTCAAATTTTTACAAAATT
Protein sequenceShow/hide protein sequence
MLCKLPSTFLKASPAGLEPPISHHGDKRKFGCSTRNIPEPKFRFKLVGLSMGDKWHLKDIDANAVQQNLNKWLLKTQNFLNEVTSPLGKTSKNKDHIPAGAFDSIEIENI
VMAEHTVNISTPNGLLSSTAVVSIEQFSRSNFYKI