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MS015613 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015613
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold444:86585..86788
RNA-Seq ExpressionMS015613
SyntenyMS015613
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7532416.1 Endonuclease/exonuclease/phosphatase superfamily [Arabidopsis thaliana x Arabidopsis arenosa]6.4e-0952.94Show/hide
Query:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM
        N TNI LI  T   R ++EF  ISLCNVSY +++K L++RLK++L D IS+TQS F+SG +I+D+I++
Subjt:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM

KAG7535603.1 Ribonuclease H domain [Arabidopsis thaliana x Arabidopsis arenosa]8.4e-0951.47Show/hide
Query:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM
        N TN+ LI  T   RS++EF  ISLCNV+Y +++K L++RLK+IL D IS+TQS F++G +I+D+I++
Subjt:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM

KAG7543067.1 Reverse transcriptase domain [Arabidopsis thaliana x Arabidopsis arenosa]4.9e-0952.94Show/hide
Query:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM
        N TNI LI  T   RS++EF  ISLCNV+Y +++K L++RLK+IL D IS+TQS F++G +I+D+I++
Subjt:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM

KAG7552162.1 Reverse transcriptase zinc-binding domain [Arabidopsis thaliana x Arabidopsis arenosa]4.9e-0952.94Show/hide
Query:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM
        N TNI LI  T   RS++EF  ISLCNV+Y +++K L++RLK+IL D IS+TQS F++G +I+D+I++
Subjt:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM

KAG7599489.1 Reverse transcriptase domain [Arabidopsis suecica]1.4e-0851.47Show/hide
Query:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM
        N TNI LI  T   R +++F  ISLCNVSY +++K L++RLK++L + IS+TQSTF+SG +I+D+I++
Subjt:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM

TrEMBL top hitse value%identityAlignment
A0A2N9FHA2 Uncharacterized protein2.6e-0855.88Show/hide
Query:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM
        N TNI LI  T    S  +F  ISLCNV Y IV K LANRLK++L   ISKTQS F+ G +ISD+I++
Subjt:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM

A0A2N9GM07 Reverse transcriptase domain-containing protein3.4e-0850Show/hide
Query:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM
        N TNIALI  T   + ++EF  ISLCNV+Y +++K +ANRLK +L+D IS+TQS F+ G  I+D+ ++
Subjt:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM

A0A6J0NST3 uncharacterized protein LOC1088582755.9e-0851.47Show/hide
Query:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM
        N TNI LI  TA    +++F  ISLCNVSY I++K L  RLK++L   IS+TQS F++G  ISD+I++
Subjt:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM

B8BDD1 Post-SET domain-containing protein4.5e-0852.94Show/hide
Query:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM
        NAT I LIS       + EF  ISLCNV Y IV+KCL NRL+ IL+D IS+ QS F+ G MI+D+ ++
Subjt:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM

V9H006 Reverse transcriptase (Fragment)2.6e-0851.47Show/hide
Query:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM
        N TNI LI      R ++EF  ISLCNVSY +++K L++RLK+IL D IS+TQS F++G +I+D+I++
Subjt:  NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGCAACAAACATAGCTCTCATCTCAAACACAGCAGGTCTAAGGTCTATTTCTGAATTTCACCGTATTAGTCTTTGCAATGTTTCATATATAATTGTTACAAAATGTCT
AGCGAATAGACTAAAGCAAATTCTAAATGACAATATCTCTAAAACTCAATCGACATTTATTTCAGGGACAATGATTTCTGATGATATCGTCATG
mRNA sequenceShow/hide mRNA sequence
AATGCAACAAACATAGCTCTCATCTCAAACACAGCAGGTCTAAGGTCTATTTCTGAATTTCACCGTATTAGTCTTTGCAATGTTTCATATATAATTGTTACAAAATGTCT
AGCGAATAGACTAAAGCAAATTCTAAATGACAATATCTCTAAAACTCAATCGACATTTATTTCAGGGACAATGATTTCTGATGATATCGTCATG
Protein sequenceShow/hide protein sequence
NATNIALISNTAGLRSISEFHRISLCNVSYIIVTKCLANRLKQILNDNISKTQSTFISGTMISDDIVM