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MS015617 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015617
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMyb_DNA-bind_3 domain-containing protein
Genome locationscaffold444:298227..298456
RNA-Seq ExpressionMS015617
SyntenyMS015617
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3433792.1 hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis]5.0e-1050Show/hide
Query:  KMQSYKRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFLL
        ++ S ++  RT  L+GHDYV+ELLN + +RC+DCFRM + V      + K+K NLK SR++T Q+QVA FLL
Subjt:  KMQSYKRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFLL

KAF7123090.1 hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]2.6e-0650Show/hide
Query:  RTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFLL
        R  RT  L+GHDYV+E+LN +  RC   FRM+ +V        K   NLK SRYLT Q+QV  FLL
Subjt:  RTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFLL

KAF7148819.1 hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]2.0e-0645.33Show/hide
Query:  DIHKMQSYKRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFLL
        + + M    R  RT  L+GHDYV+E+LN +  RC   FRM+ +V        K   NLK SRYLT Q+QV  FLL
Subjt:  DIHKMQSYKRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFLL

PON70467.1 hypothetical protein PanWU01x14_081360 [Parasponia andersonii]4.4e-0645.45Show/hide
Query:  KRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFL
        K  +R   L GH+YV+E+LN + +RCFD FRM + V   L +  K K  LK S+Y+  ++QVA FL
Subjt:  KRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFL

XP_030497764.1 protein ALP1-like [Cannabis sativa]6.3e-0540Show/hide
Query:  VDIHKMQSYKRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFL
        V+ +++   K   R  +L GH+YV+E+L+ + +RC+D FRM + V        K K  LK SRYL+ ++QVA FL
Subjt:  VDIHKMQSYKRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFL

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ7 Uncharacterized protein1.0e-0863.79Show/hide
Query:  GHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINL-KASRYLTFQKQVATFLL
        GHDYVIELLN N +RCFDCFR R+    R     K+K NL KASRYLT Q++VA FLL
Subjt:  GHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINL-KASRYLTFQKQVATFLL

A0A2P5ATJ1 Uncharacterized protein8.9e-0541.33Show/hide
Query:  IHKMQSY--KRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFL
        ++ + SY  K   R   L G++YV+E+LN    RCFD FRM + V   L +  K K  LK S+Y+  ++QVA FL
Subjt:  IHKMQSY--KRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFL

A0A2P5DB10 Uncharacterized protein2.1e-0645.45Show/hide
Query:  KRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFL
        K  +R   L GH+YV+E+LN + +RCFD FRM + V   L +  K K  LK S+Y+  ++QVA FL
Subjt:  KRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFL

A0A6A4KNZ4 Myb_DNA-bind_3 domain-containing protein (Fragment)1.2e-0450.88Show/hide
Query:  GHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFLL
        GHDYV+E+LN +  RC   FRM+ +V        K   NLK SRYLT Q+QV  FLL
Subjt:  GHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGACATCCACAAGATGCAATCCTATAAACGAACTTATAGAACTTGTTCGCTTAAAGGTCATGATTATGTGATTGAATTGTTGAATGACAACGTCACAAGATGTTTTGA
TTGTTTTAGGATGAGACAAAAGGTACATTCACGACTTTTTGCGAAAAATAAAGCTAAGATAAATTTGAAAGCCTCTAGGTATCTAACTTTTCAAAAGCAAGTTGCCACTT
TTTTGTTA
mRNA sequenceShow/hide mRNA sequence
GTTGACATCCACAAGATGCAATCCTATAAACGAACTTATAGAACTTGTTCGCTTAAAGGTCATGATTATGTGATTGAATTGTTGAATGACAACGTCACAAGATGTTTTGA
TTGTTTTAGGATGAGACAAAAGGTACATTCACGACTTTTTGCGAAAAATAAAGCTAAGATAAATTTGAAAGCCTCTAGGTATCTAACTTTTCAAAAGCAAGTTGCCACTT
TTTTGTTA
Protein sequenceShow/hide protein sequence
VDIHKMQSYKRTYRTCSLKGHDYVIELLNDNVTRCFDCFRMRQKVHSRLFAKNKAKINLKASRYLTFQKQVATFLL