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MS015654 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015654
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBiotin--protein ligase 2-like
Genome locationscaffold983:69604..70229
RNA-Seq ExpressionMS015654
SyntenyMS015654
Gene Ontology termsGO:0006464 - cellular protein modification process (biological process)
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity (molecular function)
InterPro domainsIPR003142 - Biotin protein ligase, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050822.1 biotin--protein ligase 2-like isoform X2 [Cucumis melo var. makuwa]8.7e-1897.92Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRV+VQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

XP_016900373.1 PREDICTED: biotin--protein ligase 2-like isoform X2 [Cucumis melo]8.7e-1897.92Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRV+VQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

XP_016900374.1 PREDICTED: biotin--protein ligase 2-like isoform X6 [Cucumis melo]8.7e-1897.92Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRV+VQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

XP_022141438.1 biotin--protein ligase 2-like isoform X1 [Momordica charantia]6.7e-18100Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

XP_022141440.1 biotin--protein ligase 1, chloroplastic-like isoform X2 [Momordica charantia]6.7e-18100Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

TrEMBL top hitse value%identityAlignment
A0A0A0LDB6 BPL_C domain-containing protein6.3e-2281.94Show/hide
Query:  IVQVMLISSYIFFAIDMILF-CVCSGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        IVQV++   Y  FA+DMIL  C+CSGQRV+VQEKKEDQVVENVVTIQGLTSSGYLLAIGDD QMCELHPDGN
Subjt:  IVQVMLISSYIFFAIDMILF-CVCSGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

A0A1S3BH31 biotin--protein ligase 2-like isoform X44.2e-1897.92Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRV+VQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

A0A5A7U4Q8 Biotin--protein ligase 2-like isoform X24.2e-1897.92Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRV+VQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

A0A6J1CI37 biotin--protein ligase 1, chloroplastic-like isoform X23.2e-18100Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

A0A6J1CKH6 biotin--protein ligase 2-like isoform X13.2e-18100Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

SwissProt top hitse value%identityAlignment
F4I4W2 Biotin--protein ligase 25.9e-1787.5Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRVI +EK EDQVV+NVVTIQGLTSSGYLLAIGDDN M ELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

Q9SL92 Biotin--protein ligase 1, chloroplastic1.3e-1685.42Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        S QRVIV++K EDQVV+NVVTIQGLTSSGYLLA+GDDNQM ELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

Arabidopsis top hitse value%identityAlignment
AT1G37150.1 holocarboxylase synthetase 25.8e-0482.61Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQ
        SGQRVI +EK EDQVV+NVVTIQ
Subjt:  SGQRVIVQEKKEDQVVENVVTIQ

AT1G37150.2 holocarboxylase synthetase 24.2e-1887.5Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRVI +EK EDQVV+NVVTIQGLTSSGYLLAIGDDN M ELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

AT1G37150.4 holocarboxylase synthetase 24.2e-1887.5Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        SGQRVI +EK EDQVV+NVVTIQGLTSSGYLLAIGDDN M ELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

AT2G25710.1 holocarboxylase synthase 19.3e-1885.42Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        S QRVIV++K EDQVV+NVVTIQGLTSSGYLLA+GDDNQM ELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN

AT2G25710.2 holocarboxylase synthase 19.3e-1885.42Show/hide
Query:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN
        S QRVIV++K EDQVV+NVVTIQGLTSSGYLLA+GDDNQM ELHPDGN
Subjt:  SGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATATATTTGTGACATATTGTATAGTGCAAGTTATGCTAATTAGTTCTTATATTTTCTTTGCTATAGATATGATTTTATTTTGTGTATGTAGTGGGCAAAGAGTTATTGT
ACAAGAAAAGAAAGAAGACCAAGTAGTGGAAAATGTAGTCACTATTCAGGGTTTGACATCTTCAGGATATTTGCTAGCTATTGGAGATGACAACCAAATGTGCGAGCTCC
ATCCCGATGGAAAT
mRNA sequenceShow/hide mRNA sequence
TATATATTTGTGACATATTGTATAGTGCAAGTTATGCTAATTAGTTCTTATATTTTCTTTGCTATAGATATGATTTTATTTTGTGTATGTAGTGGGCAAAGAGTTATTGT
ACAAGAAAAGAAAGAAGACCAAGTAGTGGAAAATGTAGTCACTATTCAGGGTTTGACATCTTCAGGATATTTGCTAGCTATTGGAGATGACAACCAAATGTGCGAGCTCC
ATCCCGATGGAAAT
Protein sequenceShow/hide protein sequence
YIFVTYCIVQVMLISSYIFFAIDMILFCVCSGQRVIVQEKKEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGN