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MS015660 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015660
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin-fold modifier 1
Genome locationscaffold983:101630..104049
RNA-Seq ExpressionMS015660
SyntenyMS015660
Gene Ontology termsGO:1990592 - protein K69-linked ufmylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005375 - Ubiquitin-fold modifier 1
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1205374.1 Ubiquitin-fold modifier 1 [Morella rubra]6.5e-4198.89Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
        MA AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS

XP_004140331.1 ubiquitin-fold modifier 1 [Cucumis sativus]2.9e-4198.89Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS

XP_022141697.1 ubiquitin-fold modifier 1 [Momordica charantia]1.3e-41100Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS

XP_022990075.1 ubiquitin-fold modifier 1-like [Cucurbita maxima]2.9e-4198.89Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS

XP_023547732.1 ubiquitin-fold modifier 1-like [Cucurbita pepo subsp. pepo]2.9e-4198.89Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS

TrEMBL top hitse value%identityAlignment
A0A0A0KTD7 Ubiquitin-fold modifier 11.4e-4198.89Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS

A0A6J1CKK3 Ubiquitin-fold modifier 16.3e-42100Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS

A0A6J1FF53 Ubiquitin-fold modifier 11.4e-4198.89Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS

A0A6J1JP49 Ubiquitin-fold modifier 11.4e-4198.89Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS

A0A6J1JXE3 Ubiquitin-fold modifier 11.4e-4198.89Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS

SwissProt top hitse value%identityAlignment
Q176V0 Ubiquitin-fold modifier 13.8e-3689.02Show/hide
Query:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
        KV+FK+TLTSDPKLPFKV SVPEA PFTAVLKFAAEEFKVPP TSAIIT+DG+GINPQQ+AGNVFLKHGSELRLIPRDRVG+
Subjt:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA

Q5PU89 Ubiquitin-fold modifier 12.0e-3790.7Show/hide
Query:  GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS
        G  KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINPQQ+AGNVFLKHGSELRLIPRDRVG S
Subjt:  GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS

Q94DM8 Ubiquitin-fold modifier 11.8e-4197.67Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
        AGGGKVSFK+ LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA

Q94EY2 Ubiquitin-fold modifier 11.7e-3693.83Show/hide
Query:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG
        KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINPQQ AGNVFLKHGSELRLIPRDRVG
Subjt:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG

Q9CA23 Ubiquitin-fold modifier 18.8e-4196.51Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
        A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GINPQQSAGNVFLKHGSELRLIPRDRVGA
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA

Arabidopsis top hitse value%identityAlignment
AT1G77710.1 CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).6.2e-4296.51Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
        A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GINPQQSAGNVFLKHGSELRLIPRDRVGA
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTGCTGGTGGCGGAAAGGTCTCCTTCAAAGTCACTCTCACCTCAGACCCCAAGCTCCCTTTTAAAGTGTTTAGTGTTCCAGAGGCCGCGCCCTTCACCGCTGT
CCTCAAATTTGCCGCTGAAGAATTTAAGGTGCCTCCGCAAACCAGCGCCATCATCACCAACGATGGCGTTGGAATAAATCCTCAACAAAGTGCTGGCAACGTCTTCCTCA
AGCATGGCTCTGAACTACGCCTGATTCCTCGTGATAGGGTTGGAGCTTCC
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGTGCTGGTGGCGGAAAGGTCTCCTTCAAAGTCACTCTCACCTCAGACCCCAAGCTCCCTTTTAAAGTGTTTAGTGTTCCAGAGGCCGCGCCCTTCACCGCTGT
CCTCAAATTTGCCGCTGAAGAATTTAAGGTGCCTCCGCAAACCAGCGCCATCATCACCAACGATGGCGTTGGAATAAATCCTCAACAAAGTGCTGGCAACGTCTTCCTCA
AGCATGGCTCTGAACTACGCCTGATTCCTCGTGATAGGGTTGGAGCTTCC
Protein sequenceShow/hide protein sequence
MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAS