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MS015678 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015678
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglutamic acid-rich protein-like isoform X2
Genome locationscaffold983:216847..216975
RNA-Seq ExpressionMS015678
SyntenyMS015678
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578974.1 hypothetical protein SDJN03_23422, partial [Cucurbita argyrosperma subsp. sororia]4.5e-0883.72Show/hide
Query:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
        MAEELQDND APNE+AMD +V IE KIQNAMLSRVSHFKEQA+
Subjt:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
XP_022141421.1 DNA ligase 1 [Momordica charantia]1.4e-1297.67Show/hide
Query:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
        MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQA+
Subjt:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
XP_022939456.1 DNA ligase 1-like isoform X1 [Cucurbita moschata]4.5e-0883.72Show/hide
Query:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
        MAEELQDND APNE+AMD +V IE KIQNAMLSRVSHFKEQA+
Subjt:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
XP_023551365.1 glutamic acid-rich protein-like isoform X1 [Cucurbita pepo subsp. pepo]4.5e-0883.72Show/hide
Query:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
        MAEELQDND APNE+AMD +V IE KIQNAMLSRVSHFKEQA+
Subjt:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
XP_023551366.1 glutamic acid-rich protein-like isoform X2 [Cucurbita pepo subsp. pepo]4.5e-0883.72Show/hide
Query:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
        MAEELQDND APNE+AMD +V IE KIQNAMLSRVSHFKEQA+
Subjt:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
TrEMBL top hitse value%identityAlignment
A0A6J1CJ49 DNA ligase 16.5e-1397.67Show/hide
Query:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
        MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQA+
Subjt:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
A0A6J1FFY5 DNA ligase 1-like isoform X12.2e-0883.72Show/hide
Query:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
        MAEELQDND APNE+AMD +V IE KIQNAMLSRVSHFKEQA+
Subjt:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
A0A6J1FGV2 glutamic acid-rich protein-like isoform X22.2e-0883.72Show/hide
Query:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
        MAEELQDND APNE+AMD +V IE KIQNAMLSRVSHFKEQA+
Subjt:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
A0A6J1JTY1 glutamic acid-rich protein-like isoform X11.1e-0781.4Show/hide
Query:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
        MAEELQD D APNE+AMD +V IE KIQNAMLSRVSHFKEQA+
Subjt:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
A0A6J1K3E3 glutamic acid-rich protein-like isoform X21.1e-0781.4Show/hide
Query:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
        MAEELQD D APNE+AMD +V IE KIQNAMLSRVSHFKEQA+
Subjt:  MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGAATTACAGGACAACGATGCTGCTCCTAACGAAGACGCCATGGATACGGAGGTTGATATAGAGGCGAAGATTCAGAACGCTATGCTCTCCCGCGTCTCTCA
CTTCAAGGAACAAGCCGAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGGAATTACAGGACAACGATGCTGCTCCTAACGAAGACGCCATGGATACGGAGGTTGATATAGAGGCGAAGATTCAGAACGCTATGCTCTCCCGCGTCTCTCA
CTTCAAGGAACAAGCCGAG
Protein sequenceShow/hide protein sequence
MAEELQDNDAAPNEDAMDTEVDIEAKIQNAMLSRVSHFKEQAE