; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015683 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015683
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionphotosystem II 22 kDa protein, chloroplastic
Genome locationscaffold983:244389..247054
RNA-Seq ExpressionMS015683
SyntenyMS015683
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0010196 - nonphotochemical quenching (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602094.1 Photosystem II 22 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.4e-12488.52Show/hide
Query:  MLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLP--CSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRV
        M+L+SGVCASHGV  KRE A+L QRLRPNA  +RLFF+P P      PARG  TLA+FKS+ K   KKVVKPK+KVEDGIFGTSGGIGFTKQNELFVGRV
Subjt:  MLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLP--CSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGFTKANE
        AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE A GLERAVIPPGKG RSALGLKEGGPLFGFTKANE
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGFTKANE

Query:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED
        LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEEED
Subjt:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED

XP_022141377.1 photosystem II 22 kDa protein, chloroplastic [Momordica charantia]7.7e-14699.63Show/hide
Query:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFV
        MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFV
Subjt:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFGFTKA
        GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFGFTKA
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFGFTKA

Query:  NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE
        NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEEEDE
Subjt:  NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE

XP_022952982.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata]1.8e-12688.73Show/hide
Query:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLP--CSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNEL
        MAAQTM+L+SGVCASHGV  KRE A+L QRLRPNA  +RLFF+P P      PARG  TLA+FKS+ K   KKVVKPK+KVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLP--CSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE A GLERAVIPPGKG RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED

XP_022991058.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]8.9e-12688.36Show/hide
Query:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLP--CSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNEL
        MAAQTM+L+SGVCASHGV  KRE A+L +RLRPNA  +RLFF+P P      PARG  TLA+FKS+ K   KKVVKPK+KVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLP--CSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE A GLERAVIPPGKG RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED

XP_038885143.1 photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]2.3e-12689.86Show/hide
Query:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSP--LPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNEL
        MAAQTMLLTSGVC  HGVG KRE      RLRPNA  +RLFF+P P      PARG TTLAVFKSRTKA PKKV KPKQKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSP--LPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGE ITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE A GLERAVIPPGK FRSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEE+DE
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE

TrEMBL top hitse value%identityAlignment
A0A0A0K7N4 Photosystem II protein4.9e-12287.36Show/hide
Query:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPN-APLARLFFDPSP--LPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNE
        MAAQTMLLTSGVC  HGV  KRE +     LRPN     RLFF+P P      P RG TTLAVFKSRTKA PKKV KPKQKVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPN-APLARLFFDPSP--LPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFG
        LFVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE A GLERAVIPPGK FRSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEE+DE
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE

A0A6J1CJP4 photosystem II 22 kDa protein, chloroplastic3.7e-14699.63Show/hide
Query:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFV
        MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFV
Subjt:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFGFTKA
        GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFGFTKA
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFGFTKA

Query:  NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE
        NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEEEDE
Subjt:  NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE

A0A6J1GLX6 photosystem II 22 kDa protein, chloroplastic-like8.7e-12788.73Show/hide
Query:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLP--CSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNEL
        MAAQTM+L+SGVCASHGV  KRE A+L QRLRPNA  +RLFF+P P      PARG  TLA+FKS+ K   KKVVKPK+KVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLP--CSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE A GLERAVIPPGKG RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED

A0A6J1JV31 photosystem II 22 kDa protein, chloroplastic-like4.3e-12688.36Show/hide
Query:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLP--CSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNEL
        MAAQTM+L+SGVCASHGV  KRE A+L +RLRPNA  +RLFF+P P      PARG  TLA+FKS+ K   KKVVKPK+KVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLP--CSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPE A GLERAVIPPGKG RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEEED
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED

A0A6J1JX49 photosystem II 22 kDa protein, chloroplastic-like1.3e-12287.68Show/hide
Query:  MAAQTMLLTSGVCASHGVGAKREAAAL-AQRLRPNAPLARLFFDPSP--LPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNE
        MAAQTMLLTSG CA H    KRE A++  Q LRPNA + RL F+PSP      PARG TTLA FKSRTK  PKKV KP  KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLTSGVCASHGVGAKREAAAL-AQRLRPNAPLARLFFDPSP--LPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFGF
        LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGK FRSALGLKEGGPLFGF
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKFVTDEE+D+
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE

SwissProt top hitse value%identityAlignment
P54773 Photosystem II 22 kDa protein, chloroplastic9.0e-10574.02Show/hide
Query:  AQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLPCSPAR--------GLTTLAVFKSRTKATPKKVVKP--KQKVEDGIFGTSGGIGF
        AQTMLLT+           R   +L +RL+P  PL+ LF    PL  S +           TT+A+FKS+ KA PKKV  P  KQKVEDGIFGTSGGIGF
Subjt:  AQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLPCSPAR--------GLTTLAVFKSRTKATPKKVVKP--KQKVEDGIFGTSGGIGF

Query:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDP-ETAGLERAVIPPGKGFRSALGLKEG
        TKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP    GLE+AVIPPGK F+SALGL EG
Subjt:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDP-ETAGLERAVIPPGKGFRSALGLKEG

Query:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED
        GPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEEED
Subjt:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED

Q02060 Photosystem II 22 kDa protein, chloroplastic1.9e-10775.54Show/hide
Query:  MAAQTMLLTSGVCASHGVGAKREA--AALAQRLRPNAPLARLFFDPSPLPCSPARGLT---TLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQ
        MA   +L+  GV  ++ +  KR A      Q+++P +  + LFF  SPLP S +   T   TLA+FKS+ KA PKKV KPK KVEDG+FGTSGGIGFTK+
Subjt:  MAAQTMLLTSGVCASHGVGAKREA--AALAQRLRPNAPLARLFFDPSPLPCSPARGLT---TLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQ

Query:  NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLF
        NELFVGRVAMIGFAASLLGEGITGKGIL+QLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+F+D+P T GLE+AVIPPGK  RSALGLK  GPLF
Subjt:  NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE
        GFTK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKF+TD+EE++
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE

Q9FPP4 Photosystem II 22 kDa protein, chloroplastic5.3e-10574.38Show/hide
Query:  AQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLPCSPAR--------GLTTLAVFKSRTKATPKKVVKP--KQKVEDGIFGTSGGIGF
        AQTMLLT+           R   +L +RL+P  PL+ LF    PL  S +           TT+A+FKS+ KA PKKV  P  KQKVEDGIFGTSGGIGF
Subjt:  AQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLPCSPAR--------GLTTLAVFKSRTKATPKKVVKP--KQKVEDGIFGTSGGIGF

Query:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEG
        TKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP  A GLE+AVIPPGK F+SALGL EG
Subjt:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETA-GLERAVIPPGKGFRSALGLKEG

Query:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED
        GPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEEED
Subjt:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED

Q9SMB4 Photosystem II 22 kDa protein, chloroplastic1.3e-10374.55Show/hide
Query:  AQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPL--PCSPARG-----LTTLAVFKSRTKATPKKVV-KPKQKVEDGIFGTSGGIGFTK
        AQTMLLT+           R   +L +RL+P  PL+  F    PL  P + A        TT+A+FKS+ KA  KKVV KPK+KVEDGIFGTSGGIGFTK
Subjt:  AQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPL--PCSPARG-----LTTLAVFKSRTKATPKKVV-KPKQKVEDGIFGTSGGIGFTK

Query:  QNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDP-ETAGLERAVIPPGKGFRSALGLKEGGP
        QNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP    GL++AVIPPGKGF+SALGL EGGP
Subjt:  QNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDP-ETAGLERAVIPPGKGFRSALGLKEGGP

Query:  LFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED
        LF FTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+VFFF+AA+NPGTGKFVTDEEE+
Subjt:  LFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED

Q9XF91 Photosystem II 22 kDa protein, chloroplastic3.4e-10475.72Show/hide
Query:  AQTMLLTSGVCASHGVGAKREAAALAQR------LRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQN
        AQTMLLTSGV A H +   R  + LAQ       L  N+P+A        LP S  +    LA+FK +TKA PKKV KPK KVEDGIFGTSGGIGFTK N
Subjt:  AQTMLLTSGVCASHGVGAKREAAALAQR------LRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFG
        ELFVGRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DDP T GLE+AVIPPGK  RSALGLKE GPLFG
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED
        FTKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ E+
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED

Arabidopsis top hitse value%identityAlignment
AT1G44575.1 Chlorophyll A-B binding family protein2.4e-10575.72Show/hide
Query:  AQTMLLTSGVCASHGVGAKREAAALAQR------LRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQN
        AQTMLLTSGV A H +   R  + LAQ       L  N+P+A        LP S  +    LA+FK +TKA PKKV KPK KVEDGIFGTSGGIGFTK N
Subjt:  AQTMLLTSGVCASHGVGAKREAAALAQR------LRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFG
        ELFVGRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DDP T GLE+AVIPPGK  RSALGLKE GPLFG
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED
        FTKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ E+
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEED

AT1G44575.2 Chlorophyll A-B binding family protein2.1e-6471.94Show/hide
Query:  AQTMLLTSGVCASHGVGAKREAAALAQR------LRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQN
        AQTMLLTSGV A H +   R  + LAQ       L  N+P+A        LP S  +    LA+FK +TKA PKKV KPK KVEDGIFGTSGGIGFTK N
Subjt:  AQTMLLTSGVCASHGVGAKREAAALAQR------LRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGG
        ELFVGRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DDP T GLE+AVIPPGK  RSALGLKE G
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCAAACCATGCTGCTGACGTCCGGTGTGTGCGCCAGTCACGGCGTGGGTGCGAAGCGTGAAGCCGCTGCTCTGGCGCAGAGGCTCAGACCTAACGCCCCATT
GGCTCGCCTCTTTTTCGATCCGTCGCCGTTGCCGTGCTCGCCGGCGCGTGGATTGACGACTCTCGCGGTTTTCAAGTCCAGAACCAAAGCGACTCCAAAGAAGGTTGTGA
AGCCGAAGCAGAAGGTTGAAGACGGCATTTTCGGGACGTCCGGTGGGATTGGTTTCACCAAGCAGAATGAACTCTTCGTCGGTCGTGTCGCCATGATTGGCTTTGCTGCA
TCTTTACTGGGAGAGGGGATCACCGGAAAGGGAATTCTAGCGCAATTGAACCTGGAAACTGGAGTTCCGATTTACGAGGCGGAGCCTCTTCTTCTGTTCTTCATCTTATT
CACTCTGCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGTAAGTTCATCGACGATCCGGAAACGGCCGGACTTGAACGCGCCGTCATCCCTCCCGGCAAGGGCTTCAGAT
CCGCGCTAGGTCTCAAAGAAGGAGGTCCTTTGTTCGGATTCACGAAGGCGAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTCGCGTTCTCGCTGATCGGAGAA
ATTATTACAGGTAAGGGAGCGTTGGCGCAATTGAACATCGAAACTGGAGTACCGATTAATGAGATCGAACCGCTGGTTTTGTTGAATGTTGTGTTCTTCTTCATTGCTGC
TGTGAATCCTGGAACTGGTAAATTCGTCACCGATGAGGAGGAAGATGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCAAACCATGCTGCTGACGTCCGGTGTGTGCGCCAGTCACGGCGTGGGTGCGAAGCGTGAAGCCGCTGCTCTGGCGCAGAGGCTCAGACCTAACGCCCCATT
GGCTCGCCTCTTTTTCGATCCGTCGCCGTTGCCGTGCTCGCCGGCGCGTGGATTGACGACTCTCGCGGTTTTCAAGTCCAGAACCAAAGCGACTCCAAAGAAGGTTGTGA
AGCCGAAGCAGAAGGTTGAAGACGGCATTTTCGGGACGTCCGGTGGGATTGGTTTCACCAAGCAGAATGAACTCTTCGTCGGTCGTGTCGCCATGATTGGCTTTGCTGCA
TCTTTACTGGGAGAGGGGATCACCGGAAAGGGAATTCTAGCGCAATTGAACCTGGAAACTGGAGTTCCGATTTACGAGGCGGAGCCTCTTCTTCTGTTCTTCATCTTATT
CACTCTGCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGTAAGTTCATCGACGATCCGGAAACGGCCGGACTTGAACGCGCCGTCATCCCTCCCGGCAAGGGCTTCAGAT
CCGCGCTAGGTCTCAAAGAAGGAGGTCCTTTGTTCGGATTCACGAAGGCGAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTCGCGTTCTCGCTGATCGGAGAA
ATTATTACAGGTAAGGGAGCGTTGGCGCAATTGAACATCGAAACTGGAGTACCGATTAATGAGATCGAACCGCTGGTTTTGTTGAATGTTGTGTTCTTCTTCATTGCTGC
TGTGAATCCTGGAACTGGTAAATTCGTCACCGATGAGGAGGAAGATGAA
Protein sequenceShow/hide protein sequence
MAAQTMLLTSGVCASHGVGAKREAAALAQRLRPNAPLARLFFDPSPLPCSPARGLTTLAVFKSRTKATPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAA
SLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPETAGLERAVIPPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGE
IITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEEDE