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MS015724 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015724
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold983:612269..612619
RNA-Seq ExpressionMS015724
SyntenyMS015724
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647204.1 hypothetical protein Csa_019006, partial [Cucumis sativus]8.2e-0458Show/hide
Query:  SDPAPEMAIGFSVRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFR
        S+PA +M +G+      G  K  +VIPK+RKLVKTMMYHSIK F+ SFFR
Subjt:  SDPAPEMAIGFSVRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFR

KAE8647260.1 hypothetical protein Csa_018328, partial [Cucumis sativus]1.7e-0466.67Show/hide
Query:  VRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFRP
        +R   GG K K+VIPK+RKLVKTM+YHS+KDF+ S FRP
Subjt:  VRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFRP

KAG6602131.1 hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]3.3e-0536Show/hide
Query:  MGSRITPADNRVL-----VIFKSGSIAGNPIA-VDGAEAGSKNPVGPKLAVKV-KPKGESTYVVAPAPPVTS-----------------------DPA-P
        M  R++P DNRVL           SI  N +A +D A++       P +  +V   K +S     PA P T+                        PA P
Subjt:  MGSRITPADNRVL-----VIFKSGSIAGNPIA-VDGAEAGSKNPVGPKLAVKV-KPKGESTYVVAPAPPVTS-----------------------DPA-P

Query:  EMAIGFSVRRGH--GGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFRPLP
        E A+  +   G+  G GK K+VIPK+RKLVKTMMYH IK+F+KS FR  P
Subjt:  EMAIGFSVRRGH--GGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFRPLP

KAG6602134.1 hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0840.48Show/hide
Query:  MGSRITPADNRVLVIFKSGSIAGNPIAVDGAEAGSKNPVGPKLAVKVK---------PKGESTYVVAPAPPVTSDPAPEMAIGFSVRRGHGGGKFKTVIP
        M  R++P DNR L   +    A +P +V+G      +PV  ++A   K          K +S   + PA P T+  +       SV    G GK K+VIP
Subjt:  MGSRITPADNRVLVIFKSGSIAGNPIAVDGAEAGSKNPVGPKLAVKVK---------PKGESTYVVAPAPPVTSDPAPEMAIGFSVRRGHGGGKFKTVIP

Query:  KRRKLVKTMMYHSIKDFVKSFFRPLP
        K+RKLVKTMMYH IKDF+KS FRP P
Subjt:  KRRKLVKTMMYHSIKDFVKSFFRPLP

KGN47677.1 hypothetical protein Csa_018325 [Cucumis sativus]3.9e-0648.65Show/hide
Query:  GPKLAVKVKPKGESTYVVAPAPPVTSDPAPEMAIGFSVRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFF
        G +L ++V+P+GES  VV       SD   +MA+G+      GG K K+VIP +RKLVK MMY SIK+FV S F
Subjt:  GPKLAVKVKPKGESTYVVAPAPPVTSDPAPEMAIGFSVRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFF

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ7 Uncharacterized protein8.0e-0566.67Show/hide
Query:  VRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFRP
        +R   GG K K+VIPK+RKLVKTM+YHS+KDF+ S FRP
Subjt:  VRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFRP

A0A0A0KH01 Uncharacterized protein1.9e-0648.65Show/hide
Query:  GPKLAVKVKPKGESTYVVAPAPPVTSDPAPEMAIGFSVRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFF
        G +L ++V+P+GES  VV       SD   +MA+G+      GG K K+VIP +RKLVK MMY SIK+FV S F
Subjt:  GPKLAVKVKPKGESTYVVAPAPPVTSDPAPEMAIGFSVRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFF

A0A5D3D590 Uncharacterized protein6.8e-0449.15Show/hide
Query:  PAPPVTSDPAPEMAIGFSVRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFRPLP
        P  P  +  A E AI +      G G  K+VIPK+RKLVK MMY  IK+++KS FRP P
Subjt:  PAPPVTSDPAPEMAIGFSVRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFRPLP

A0A6J1CJW3 uncharacterized protein LOC1110119634.0e-0445.68Show/hide
Query:  PVGPKLAVKVKPKGESTYVVAPAPPVTSDPAPEMAIGFSVRRG-HGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFRPLP
        P   ++ +K +P  + T  +AP  PV      EMA+  +   G   GGK K+VIPKRR LVKTM+Y+ IKDF+ S FRP P
Subjt:  PVGPKLAVKVKPKGESTYVVAPAPPVTSDPAPEMAIGFSVRRG-HGGGKFKTVIPKRRKLVKTMMYHSIKDFVKSFFRPLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCCAGAATCACGCCTGCGGACAATCGGGTGCTCGTGATTTTCAAATCCGGATCAATCGCCGGGAATCCGATCGCCGTCGACGGGGCGGAGGCTGGTTCGAAGAA
TCCGGTGGGACCGAAACTGGCCGTGAAGGTGAAGCCCAAAGGAGAATCGACTTATGTGGTGGCGCCGGCGCCGCCGGTAACGTCGGACCCGGCGCCTGAAATGGCGATTG
GGTTTAGCGTACGCCGTGGCCACGGCGGCGGAAAGTTCAAAACTGTGATTCCGAAGAGGAGGAAGTTAGTGAAGACGATGATGTACCATTCCATAAAGGATTTCGTTAAA
TCCTTCTTTCGTCCGCTGCCG
mRNA sequenceShow/hide mRNA sequence
ATGGGATCCAGAATCACGCCTGCGGACAATCGGGTGCTCGTGATTTTCAAATCCGGATCAATCGCCGGGAATCCGATCGCCGTCGACGGGGCGGAGGCTGGTTCGAAGAA
TCCGGTGGGACCGAAACTGGCCGTGAAGGTGAAGCCCAAAGGAGAATCGACTTATGTGGTGGCGCCGGCGCCGCCGGTAACGTCGGACCCGGCGCCTGAAATGGCGATTG
GGTTTAGCGTACGCCGTGGCCACGGCGGCGGAAAGTTCAAAACTGTGATTCCGAAGAGGAGGAAGTTAGTGAAGACGATGATGTACCATTCCATAAAGGATTTCGTTAAA
TCCTTCTTTCGTCCGCTGCCG
Protein sequenceShow/hide protein sequence
MGSRITPADNRVLVIFKSGSIAGNPIAVDGAEAGSKNPVGPKLAVKVKPKGESTYVVAPAPPVTSDPAPEMAIGFSVRRGHGGGKFKTVIPKRRKLVKTMMYHSIKDFVK
SFFRPLP