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MS015741 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015741
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAC domain-containing protein
Genome locationscaffold277:13607..13897
RNA-Seq ExpressionMS015741
SyntenyMS015741
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571617.1 NAC domain-containing protein JA2L, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2258.95Show/hide
Query:  LIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT
        L VG  F P+DQ LL+ +L  KI+G  Y +  V DCDLYG  EP +IW  FGG D E LYFFTKLKRSTNNS +LSAHI RK+G  + +WS EN+
Subjt:  LIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT

KAG6571624.1 NAC transcription factor, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2257.89Show/hide
Query:  LIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT
        L VG  F P+DQ LL+ +L  K++G  Y +  V DCDLYG  EP ++W  FGGID E LYFFTKLKRSTNNS +LSAHI RK+G  + +WS EN+
Subjt:  LIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT

XP_004142192.1 NAC domain-containing protein 83 [Cucumis sativus]5.5e-2260.82Show/hide
Query:  HYLIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT
        HY  VG  F P+DQ LL ++L  KIYG  Y Q  V D DLYG  EP +IW+SFGGID E LYFFTKLKRST NS  LS HI RKIG  + +WS EN+
Subjt:  HYLIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT

XP_022145828.1 protein BEARSKIN2-like [Momordica charantia]6.1e-3778.35Show/hide
Query:  HYLIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT
        H LIVGYNFEPSDQSLLE+FLFNKIYGY+YLQ PVSDCDLYGH+EP +I +SFGGID E LYFFTKL RSTNNS QLSAH+TRK+G    +WS ENT
Subjt:  HYLIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT

XP_022963781.1 NAC domain-containing protein 30-like [Cucurbita moschata]3.2e-2258.95Show/hide
Query:  LIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT
        L VG  F P+DQ LL+ +L  KI+G  Y +  V DCDLYG  EP +IW  FGG D E LYFFTKLKRSTNNS +LSAHI RK+G  + +WS EN+
Subjt:  LIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT

TrEMBL top hitse value%identityAlignment
A0A0A0KXM1 NAC domain-containing protein2.7e-2260.82Show/hide
Query:  HYLIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT
        HY  VG  F P+DQ LL ++L  KIYG  Y Q  V D DLYG  EP +IW+SFGGID E LYFFTKLKRST NS  LS HI RKIG  + +WS EN+
Subjt:  HYLIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT

A0A0A0LFJ5 NAC domain-containing protein2.7e-2260.82Show/hide
Query:  HYLIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT
        HY  VG  F P+DQ LL ++L  KIYG  Y Q  V D DLYG  EP +IW+SFGGID E LYFFTKLKRST NS  LS HI RKIG  + +WS EN+
Subjt:  HYLIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT

A0A6J1CX07 protein BEARSKIN2-like3.0e-3778.35Show/hide
Query:  HYLIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT
        H LIVGYNFEPSDQSLLE+FLFNKIYGY+YLQ PVSDCDLYGH+EP +I +SFGGID E LYFFTKL RSTNNS QLSAH+TRK+G    +WS ENT
Subjt:  HYLIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT

A0A6J1HH13 NAC domain-containing protein 30-like1.6e-2258.95Show/hide
Query:  LIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT
        L VG  F P+DQ LL+ +L  KI+G  Y +  V DCDLYG  EP +IW  FGG D E LYFFTKLKRSTNNS +LSAHI RK+G  + +WS EN+
Subjt:  LIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT

A0A6J1HSR6 NAC domain-containing protein 72-like2.7e-2258.95Show/hide
Query:  LIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT
        L VG  F+P+D  LL+ +L  KI+G  Y +  V DCDLYG  EP +IW  FGGID E LYFFTKLKRSTNNS +LSAHI RK+G  + +WS EN+
Subjt:  LIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01520.1 NAC domain containing protein 672.5e-0431.18Show/hide
Query:  GYNFEPSDQSLLENFLFNKIYGYEYLQD-PVSDCDLYGHNEPCKIWKSFGGIDSEGL--YFFT----------KLKRSTNNSRQLSAHITRKI
        GY F P+ + ++ ++L NKI G  +L D  +S+ ++  H +P K       I SE L  YFF+          K+KR+T +     + + RKI
Subjt:  GYNFEPSDQSLLENFLFNKIYGYEYLQD-PVSDCDLYGHNEPCKIWKSFGGIDSEGL--YFFT----------KLKRSTNNSRQLSAHITRKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATTATTTGATAGTAGGCTACAATTTCGAGCCTTCCGATCAAAGTCTGCTGGAGAATTTTCTCTTTAATAAGATCTACGGATACGAATATCTTCAAGATCCTGTATCCGA
TTGTGATCTCTATGGCCACAACGAACCTTGTAAAATTTGGAAATCTTTTGGTGGTATTGACAGTGAAGGTCTTTATTTCTTCACTAAGCTCAAGAGGTCAACGAACAACT
CTAGACAATTATCAGCTCATATTACTCGAAAGATTGGCTTCACCGATGAGAGTTGGAGCAGCGAGAATACG
mRNA sequenceShow/hide mRNA sequence
CATTATTTGATAGTAGGCTACAATTTCGAGCCTTCCGATCAAAGTCTGCTGGAGAATTTTCTCTTTAATAAGATCTACGGATACGAATATCTTCAAGATCCTGTATCCGA
TTGTGATCTCTATGGCCACAACGAACCTTGTAAAATTTGGAAATCTTTTGGTGGTATTGACAGTGAAGGTCTTTATTTCTTCACTAAGCTCAAGAGGTCAACGAACAACT
CTAGACAATTATCAGCTCATATTACTCGAAAGATTGGCTTCACCGATGAGAGTTGGAGCAGCGAGAATACG
Protein sequenceShow/hide protein sequence
HYLIVGYNFEPSDQSLLENFLFNKIYGYEYLQDPVSDCDLYGHNEPCKIWKSFGGIDSEGLYFFTKLKRSTNNSRQLSAHITRKIGFTDESWSSENT