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MS015744 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015744
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMuDRA-like transposase
Genome locationscaffold277:54548..54760
RNA-Seq ExpressionMS015744
SyntenyMS015744
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153251.1 uncharacterized protein LOC111020787 [Momordica charantia]6.7e-2574.65Show/hide
Query:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ
        MK NFEF VKKSTK L+T+GCT +GCKW LRAK I+G D+FIISKF D+HKC RE+LNHD++QARSWVVGQ
Subjt:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]1.1e-2269.01Show/hide
Query:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ
        MK NFEF VKKSTK LY +GC   GCKW L A RIRG+D+F ISK+ D+H CT+E+LNHD++QARSWVVGQ
Subjt:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ

XP_022156802.1 uncharacterized protein LOC111023635 [Momordica charantia]4.3e-2473.24Show/hide
Query:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ
        MK NF+F VKKSTK L+T+GCT +GCKW LRAK I+G D+FIISKF D HKC RE+LNHD++QARSWVVGQ
Subjt:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ

XP_022156943.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]9.7e-2471.83Show/hide
Query:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ
        MK NFEF VKKSTK LYT+GCT +GCKW LR K IR  D+FIISKF D+HKC R++LNHD++QA+SWVVGQ
Subjt:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ

XP_022158254.1 uncharacterized protein LOC111024785 [Momordica charantia]6.9e-2264.79Show/hide
Query:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ
        MK NFE+ VKKSTK+LYT+GC  +GCKW LR+++I+GSDTF+IS F ++H CTRE++ HD++QARS VVGQ
Subjt:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ

TrEMBL top hitse value%identityAlignment
A0A6J1DK28 uncharacterized protein LOC1110207873.2e-2574.65Show/hide
Query:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ
        MK NFEF VKKSTK L+T+GCT +GCKW LRAK I+G D+FIISKF D+HKC RE+LNHD++QARSWVVGQ
Subjt:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ

A0A6J1DL12 uncharacterized protein LOC1110220775.2e-2369.01Show/hide
Query:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ
        MK NFEF VKKSTK LY +GC   GCKW L A RIRG+D+F ISK+ D+H CT+E+LNHD++QARSWVVGQ
Subjt:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ

A0A6J1DS25 protein FAR-RED ELONGATED HYPOCOTYL 3-like4.7e-2471.83Show/hide
Query:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ
        MK NFEF VKKSTK LYT+GCT +GCKW LR K IR  D+FIISKF D+HKC R++LNHD++QA+SWVVGQ
Subjt:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ

A0A6J1DSY0 uncharacterized protein LOC1110236352.1e-2473.24Show/hide
Query:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ
        MK NF+F VKKSTK L+T+GCT +GCKW LRAK I+G D+FIISKF D HKC RE+LNHD++QARSWVVGQ
Subjt:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ

A0A6J1DYV5 uncharacterized protein LOC1110247853.3e-2264.79Show/hide
Query:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ
        MK NFE+ VKKSTK+LYT+GC  +GCKW LR+++I+GSDTF+IS F ++H CTRE++ HD++QARS VVGQ
Subjt:  MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase1.4e-0436Show/hide
Query:  VKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLN
        V+++ K +YT  C    CKW LRA R+       I+K+   H C+ E  N
Subjt:  VKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCGTAATTTTGAATTTCATGTAAAAAAATCTACAAAGAATTTGTACACTATTGGATGCACTATGGAAGGTTGTAAGTGGGAGTTGCGTGCTAAAAGGATCCGAGG
TTCTGACACATTCATCATTTCAAAGTTTATCGATATCCACAAATGCACACGTGAGTTACTAAACCATGACTACAAGCAAGCTAGAAGTTGGGTGGTTGGTCAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCGTAATTTTGAATTTCATGTAAAAAAATCTACAAAGAATTTGTACACTATTGGATGCACTATGGAAGGTTGTAAGTGGGAGTTGCGTGCTAAAAGGATCCGAGG
TTCTGACACATTCATCATTTCAAAGTTTATCGATATCCACAAATGCACACGTGAGTTACTAAACCATGACTACAAGCAAGCTAGAAGTTGGGTGGTTGGTCAA
Protein sequenceShow/hide protein sequence
MKRNFEFHVKKSTKNLYTIGCTMEGCKWELRAKRIRGSDTFIISKFIDIHKCTRELLNHDYKQARSWVVGQ