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MS015747 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015747
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold277:67876..68028
RNA-Seq ExpressionMS015747
SyntenyMS015747
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65940.1 hypothetical protein VITISV_038402 [Vitis vinifera]1.6e-0443.4Show/hide
Query:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
        FWKD W + EPLC  +P  FA  N K  +V + W    E  +W+  F RNL D
Subjt:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
CAN70224.1 hypothetical protein VITISV_020348 [Vitis vinifera]7.2e-0545.28Show/hide
Query:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
        FWKD W N EPLC T+P  FA  + K  +V   W    +  SW+I F +NL D
Subjt:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
RVW37926.1 LINE-1 reverse transcriptase-like [Vitis vinifera]2.1e-0440Show/hide
Query:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWSSEI----NSWDICFRRNLKD
        FW+D W  N PLC ++P  FA    K  +V +FW S +      W+ CF R L D
Subjt:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWSSEI----NSWDICFRRNLKD
RVW71774.1 hypothetical protein CK203_055218 [Vitis vinifera]2.1e-0443.4Show/hide
Query:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
        FWKD W + EPLC  +P  FA  N K  +V   W    E  +W+  F RNL D
Subjt:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
RVW94700.1 hypothetical protein CK203_029915 [Vitis vinifera]7.2e-0545.28Show/hide
Query:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
        FWKD W N EPLC T+P  FA  + K  +V   W    +  SW+I F +NL D
Subjt:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
TrEMBL top hitse value%identityAlignment
A0A438DR19 LINE-1 reverse transcriptase-like1.0e-0440Show/hide
Query:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWSSEI----NSWDICFRRNLKD
        FW+D W  N PLC ++P  FA    K  +V +FW S +      W+ CF R L D
Subjt:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWSSEI----NSWDICFRRNLKD
A0A438GHV3 Reverse transcriptase domain-containing protein1.0e-0443.4Show/hide
Query:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
        FWKD W + EPLC  +P  FA  N K  +V   W    E  +W+  F RNL D
Subjt:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
A0A438ID98 Uncharacterized protein3.5e-0545.28Show/hide
Query:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
        FWKD W N EPLC T+P  FA  + K  +V   W    +  SW+I F +NL D
Subjt:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
A5BIZ9 Uncharacterized protein3.5e-0545.28Show/hide
Query:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
        FWKD W N EPLC T+P  FA  + K  +V   W    +  SW+I F +NL D
Subjt:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
A5BSJ6 Reverse transcriptase domain-containing protein7.8e-0543.4Show/hide
Query:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
        FWKD W + EPLC  +P  FA  N K  +V + W    E  +W+  F RNL D
Subjt:  FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWS--SEINSWDICFRRNLKD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTGGAAAGATAATTGGCTCAACAATGAGCCTTTATGCCGCACCTACCCCCTTTTTTTTGCTTTCCACAACAGGAAGCTTGGCTATGTTCGGGAATTTTGGTCTTCGGA
AATCAACTCATGGGATATTTGCTTTCGGAGAAACTTAAAGGAT
mRNA sequenceShow/hide mRNA sequence
TTTTGGAAAGATAATTGGCTCAACAATGAGCCTTTATGCCGCACCTACCCCCTTTTTTTTGCTTTCCACAACAGGAAGCTTGGCTATGTTCGGGAATTTTGGTCTTCGGA
AATCAACTCATGGGATATTTGCTTTCGGAGAAACTTAAAGGAT
Protein sequenceShow/hide protein sequence
FWKDNWLNNEPLCRTYPLFFAFHNRKLGYVREFWSSEINSWDICFRRNLKD