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MS015750 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015750
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold277:75759..76004
RNA-Seq ExpressionMS015750
SyntenyMS015750
Gene Ontology termsGO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2691633.1 hypothetical protein I3760_08G016400 [Carya illinoinensis]1.5e-0738.55Show/hide
Query:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIA--EGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKETS
        +TV HL L+C FA   WNY  S + LA   P +V   +A   G  G+    +   +W  V   +LW +W E+NNR FE++E S
Subjt:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIA--EGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKETS

KAG7965770.1 hypothetical protein I3843_08G016900 [Carya illinoinensis]1.5e-0738.55Show/hide
Query:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIA--EGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKETS
        +TV HL L+C FA   WNY  S + LA   P +V   +A   G  G+    +   +W  V   +LW +W E+NNR FE++E S
Subjt:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIA--EGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKETS

OVA02993.1 Reverse transcriptase zinc-binding domain [Macleaya cordata]6.1e-0635.44Show/hide
Query:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE
        +TV HL L+CSFA + W    +   +   F  +V     EG   S+       LW  +  A+ W+LWKE+N R+F +KE
Subjt:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE

RVW20303.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]6.1e-0635.9Show/hide
Query:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENK
        +TV HLFL+CS     W+ +  L  +    P+ V   IA  F G     +  +LW     A+LW++W+E+N R FE+K
Subjt:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENK

RVW91431.1 putative ribonuclease H protein [Vitis vinifera]1.6e-0637.04Show/hide
Query:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFG--GSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE
        +++ HLFL+C      W+ + +L  LA   P+ ++  +   F   G+ L+GK   LW     ALLW++W+E+NNR FE+KE
Subjt:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFG--GSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE

TrEMBL top hitse value%identityAlignment
A0A2N9G2S3 Reverse transcriptase domain-containing protein6.0e-0735.44Show/hide
Query:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE
        ++V HL L+C +A + W+ I  L  ++   P +  Y +   +     KG AY++WN +   L+WLLW+E+N R FE+ E
Subjt:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE

A0A2N9G662 zf-RVT domain-containing protein1.6e-0733.33Show/hide
Query:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKETS
        +++GHLF++C    + W+ + SL  +    P++V   I E  G +  +    I+WN V   L+W +W+E+N+R FE+ ET+
Subjt:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKETS

A0A2N9IDN0 Reverse transcriptase domain-containing protein6.0e-0735.44Show/hide
Query:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE
        ++V HL L+C +A + W+ I  L  ++   P +  Y +   +     KG AY++WN +   L+WLLW+E+N R FE+ E
Subjt:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE

A0A2N9J577 Rab3 GTPase-activating protein catalytic subunit9.2e-0837.33Show/hide
Query:  HLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE
        HL L+CS+A   W++  SL  ++   P ++  F+A   GG   K +A ++W  V   ++WLLW+E+N+R FE +E
Subjt:  HLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE

A0A438I409 Putative ribonuclease H protein7.8e-0737.04Show/hide
Query:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFG--GSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE
        +++ HLFL+C      W+ + +L  LA   P+ ++  +   F   G+ L+GK   LW     ALLW++W+E+NNR FE+KE
Subjt:  KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFG--GSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAACGGTGGGCCATCTGTTTCTTTATTGCTCTTTCGCTACTCAGGCTTGGAACTACATAGCTTCTCTTCTAGATCTCGCTCTTTGTTTTCCCAAGAAAGTGGATTATTT
CATTGCCGAAGGTTTCGGTGGCTCCGTTCTCAAAGGGAAAGCCTACATTCTGTGGAATTGTGTTGCTAGGGCTCTTCTTTGGCTCCTTTGGAAGGAAAAAAACAATAGAT
TTTTTGAGAACAAAGAGACCTCGTTT
mRNA sequenceShow/hide mRNA sequence
AAAACGGTGGGCCATCTGTTTCTTTATTGCTCTTTCGCTACTCAGGCTTGGAACTACATAGCTTCTCTTCTAGATCTCGCTCTTTGTTTTCCCAAGAAAGTGGATTATTT
CATTGCCGAAGGTTTCGGTGGCTCCGTTCTCAAAGGGAAAGCCTACATTCTGTGGAATTGTGTTGCTAGGGCTCTTCTTTGGCTCCTTTGGAAGGAAAAAAACAATAGAT
TTTTTGAGAACAAAGAGACCTCGTTT
Protein sequenceShow/hide protein sequence
KTVGHLFLYCSFATQAWNYIASLLDLALCFPKKVDYFIAEGFGGSVLKGKAYILWNCVARALLWLLWKEKNNRFFENKETSF