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MS015782 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015782
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCleavage and polyadenylation specificity factor subunit 1
Genome locationscaffold462:87467..87655
RNA-Seq ExpressionMS015782
SyntenyMS015782
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK05762.1 cleavage and polyadenylation specificity factor subunit 1 [Cucumis melo var. makuwa]9.8e-0434.92Show/hide
Query:  EYALSWDNLIIVTSCCFHYDPVKLLKAIKEINDYVSSCNPFQADKVILQVRSQEQARFLCMNK
        E  L W+ ++++T   FH D  K+++ +K+  D+  S  PF ADK ++  + +EQA  +C NK
Subjt:  EYALSWDNLIIVTSCCFHYDPVKLLKAIKEINDYVSSCNPFQADKVILQVRSQEQARFLCMNK
TrEMBL top hitse value%identityAlignment
A0A5D3C3G6 Cleavage and polyadenylation specificity factor subunit 14.8e-0434.92Show/hide
Query:  EYALSWDNLIIVTSCCFHYDPVKLLKAIKEINDYVSSCNPFQADKVILQVRSQEQARFLCMNK
        E  L W+ ++++T   FH D  K+++ +K+  D+  S  PF ADK ++  + +EQA  +C NK
Subjt:  EYALSWDNLIIVTSCCFHYDPVKLLKAIKEINDYVSSCNPFQADKVILQVRSQEQARFLCMNK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATATGCATTGTCATGGGATAATCTAATTATAGTCACAAGTTGTTGCTTTCACTATGATCCGGTCAAACTTTTGAAAGCCATTAAAGAAATAAATGACTATGTTTCTTC
TTGCAATCCTTTCCAAGCAGATAAAGTAATTCTACAGGTTAGAAGCCAAGAACAAGCTAGGTTTTTATGCATGAATAAG
mRNA sequenceShow/hide mRNA sequence
GAATATGCATTGTCATGGGATAATCTAATTATAGTCACAAGTTGTTGCTTTCACTATGATCCGGTCAAACTTTTGAAAGCCATTAAAGAAATAAATGACTATGTTTCTTC
TTGCAATCCTTTCCAAGCAGATAAAGTAATTCTACAGGTTAGAAGCCAAGAACAAGCTAGGTTTTTATGCATGAATAAG
Protein sequenceShow/hide protein sequence
EYALSWDNLIIVTSCCFHYDPVKLLKAIKEINDYVSSCNPFQADKVILQVRSQEQARFLCMNK