CuGenDBv2

Gene ID	MS015794
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Alpha-mannosidase
Genome location	scaffold943_2:18274..18381
RNA-Seq Expression	MS015794
Synteny	MS015794
Gene Ontology terms	GO:0006013 - mannose metabolic process (biological process) GO:0004559 - alpha-mannosidase activity (molecular function) GO:0030246 - carbohydrate binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000602 - Glycoside hydrolase family 38, N-terminal domain IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR027291 - Glycoside hydrolase 38, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7016625.1 putative alpha-mannosidase [Cucurbita argyrosperma subsp. argyrosperma]

3.8e-08

86.11

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFIKEEFGVTP V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

XP_022991108.1 probable alpha-mannosidase At5g13980 isoform X2 [Cucurbita maxima]

3.8e-08

86.11

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFIKEEFGVTP V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

XP_023539965.1 probable alpha-mannosidase At5g13980 [Cucurbita pepo subsp. pepo]

3.8e-08

86.11

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFIKEEFGVTP V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

XP_023550354.1 probable alpha-mannosidase At5g13980 isoform X3 [Cucurbita pepo subsp. pepo]

3.8e-08

86.11

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFIKEEFGVTP V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

XP_038907182.1 probable alpha-mannosidase At5g13980 isoform X1 [Benincasa hispida]

3.8e-08

86.11

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFIKEEFGVTP V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

TrEMBL top hits

e value

%identity

Alignment

A0A444YS34 Alpha-mannosidase

3.1e-08

86.11

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFIKEEFGVTP V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

A0A6J1CIK3 Alpha-mannosidase

1.8e-08

86.11

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFIKEEFGVTP V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

A0A6J1H790 Alpha-mannosidase

1.8e-08

86.11

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFIKEEFGVTP V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

A0A6J1JKU4 Alpha-mannosidase

1.8e-08

86.11

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFIKEEFGVTP V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

A0A6J1JV83 Alpha-mannosidase

1.8e-08

86.11

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFIKEEFGVTP V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

SwissProt top hits

e value

%identity

Alignment

C0HJB3 Alpha-mannosidase

9.6e-07

63.89

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRF++E+F   P   WQID PFGHSAV+ YLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

P34098 Lysosomal alpha-mannosidase

2.0e-04

59.38

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Query:  TLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRA
        TL H+F+ E FGV P + W ID PFGHSA +A
Subjt:  TLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRA

P94078 Alpha-mannosidase At3g26720

2.3e-08

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL H+FIK EFG  P V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

Q8LPJ3 Probable alpha-mannosidase At5g13980

1.8e-08

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFI  EF VTP + WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

Q9FKW9 Probable alpha-mannosidase At5g66150

1.5e-07

66.67

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TT  HRFIK++F  TP  +WQID PFGHS+V+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

Arabidopsis top hits

e value

%identity

Alignment

AT3G26720.1 Glycosyl hydrolase family 38 protein

1.6e-09

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL H+FIK EFG  P V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

AT3G26720.2 Glycosyl hydrolase family 38 protein

1.6e-09

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL H+FIK EFG  P V WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

AT5G13980.1 Glycosyl hydrolase family 38 protein

1.2e-09

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFI  EF VTP + WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

AT5G13980.2 Glycosyl hydrolase family 38 protein

1.2e-09

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFI  EF VTP + WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

AT5G13980.3 Glycosyl hydrolase family 38 protein

1.2e-09

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Query:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL
        TTL HRFI  EF VTP + WQID PFGHSAV+AYLL
Subjt:  TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

Sequences

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CDS sequence

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ACAACTCTTGCGCATAGATTTATAAAGGAAGAATTCGGTGTTACTCCTATAGTTAGTTGGCAAATTGATCATCCCTTTGGCCATTCTGCCGTGCGGGCTTACCTATTG

mRNA sequence

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ACAACTCTTGCGCATAGATTTATAAAGGAAGAATTCGGTGTTACTCCTATAGTTAGTTGGCAAATTGATCATCCCTTTGGCCATTCTGCCGTGCGGGCTTACCTATTG

Protein sequence

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TTLAHRFIKEEFGVTPIVSWQIDHPFGHSAVRAYLL

MS015794 (gene) of Bitter gourd (TR) v1 genome