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MS015809 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015809
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionThioredoxin
Genome locationscaffold943_2:104069..104901
RNA-Seq ExpressionMS015809
SyntenyMS015809
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily
IPR044193 - Thioredoxin-like 3-3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063811.1 thioredoxin-like 3-3 [Cucumis melo var. makuwa]1.2e-5687.6Show/hide
Query:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT
        MED EKKGLEGTG  LPVN  GNLKSASSDQDFKDVLLQIKSSKTT   V+++    CRVCSQILPAFCRLSNNFPK+SFIYADIDECPETTQHIRYTPT
Subjt:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT

Query:  FHFYRDGERVDEMFGAGEERLHDRLWLHS
        FHFYRDGERVDEMFGAGEERLHDRLWLHS
Subjt:  FHFYRDGERVDEMFGAGEERLHDRLWLHS

XP_008462474.1 PREDICTED: thioredoxin-like 3-3 [Cucumis melo]1.4e-5788.37Show/hide
Query:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT
        MED EKKGLEGTG  LPVN HGNLKSASSDQDFKDVLLQIKSSKTT   V+++    CRVCSQILPAFCRLSNNFPK+SFIYADIDECPETTQHIRYTPT
Subjt:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT

Query:  FHFYRDGERVDEMFGAGEERLHDRLWLHS
        FHFYRDGERVDEMFGAGEERLHDRLWLHS
Subjt:  FHFYRDGERVDEMFGAGEERLHDRLWLHS

XP_011657665.1 thioredoxin-like 3-3 [Cucumis sativus]1.8e-5788.37Show/hide
Query:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT
        MED EKKGLEGTGL LPVN HGNLKSASSDQDFKDVLLQIKSSKTT   V+++    CRVCSQILPAFCRLSNNFPK+SFIYADIDECPETTQHIRYTPT
Subjt:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT

Query:  FHFYRDGERVDEMFGAGEERLHDRLWLHS
        FHFYR GERVDEMFGAGEERLHDRLWLHS
Subjt:  FHFYRDGERVDEMFGAGEERLHDRLWLHS

XP_022143884.1 thioredoxin-like 3-3 [Momordica charantia]3.0e-6091.47Show/hide
Query:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT
        MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTT   V+++    CRVCSQILPAFCRLSNNFPKL FIYADIDECPETTQHIRYTPT
Subjt:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT

Query:  FHFYRDGERVDEMFGAGEERLHDRLWLHS
        FHFYRDGERVDEMFGAGEERLHDRLWLHS
Subjt:  FHFYRDGERVDEMFGAGEERLHDRLWLHS

XP_022963258.1 thioredoxin-like 3-3 [Cucurbita moschata]9.0e-5786.82Show/hide
Query:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT
        MED EKKGLEG GLD  VNRHGNLKSASSDQDFKDVLLQIKSSKTT   V+++    CRVCSQILPAFCRLSNNFPK+SFIYADIDECPETT+HIRYTPT
Subjt:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT

Query:  FHFYRDGERVDEMFGAGEERLHDRLWLHS
        FHFYRDGERVDEMFG GEERLHDRLWLHS
Subjt:  FHFYRDGERVDEMFGAGEERLHDRLWLHS

TrEMBL top hitse value%identityAlignment
A0A0A0KH96 Thioredoxin domain-containing protein8.8e-5888.37Show/hide
Query:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT
        MED EKKGLEGTGL LPVN HGNLKSASSDQDFKDVLLQIKSSKTT   V+++    CRVCSQILPAFCRLSNNFPK+SFIYADIDECPETTQHIRYTPT
Subjt:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT

Query:  FHFYRDGERVDEMFGAGEERLHDRLWLHS
        FHFYR GERVDEMFGAGEERLHDRLWLHS
Subjt:  FHFYRDGERVDEMFGAGEERLHDRLWLHS

A0A1S3CH29 thioredoxin-like 3-36.7e-5888.37Show/hide
Query:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT
        MED EKKGLEGTG  LPVN HGNLKSASSDQDFKDVLLQIKSSKTT   V+++    CRVCSQILPAFCRLSNNFPK+SFIYADIDECPETTQHIRYTPT
Subjt:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT

Query:  FHFYRDGERVDEMFGAGEERLHDRLWLHS
        FHFYRDGERVDEMFGAGEERLHDRLWLHS
Subjt:  FHFYRDGERVDEMFGAGEERLHDRLWLHS

A0A5D3C5X7 Thioredoxin-like 3-36.7e-5888.37Show/hide
Query:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT
        MED EKKGLEGTG  LPVN HGNLKSASSDQDFKDVLLQIKSSKTT   V+++    CRVCSQILPAFCRLSNNFPK+SFIYADIDECPETTQHIRYTPT
Subjt:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT

Query:  FHFYRDGERVDEMFGAGEERLHDRLWLHS
        FHFYRDGERVDEMFGAGEERLHDRLWLHS
Subjt:  FHFYRDGERVDEMFGAGEERLHDRLWLHS

A0A6J1CQN4 thioredoxin-like 3-31.4e-6091.47Show/hide
Query:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT
        MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTT   V+++    CRVCSQILPAFCRLSNNFPKL FIYADIDECPETTQHIRYTPT
Subjt:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT

Query:  FHFYRDGERVDEMFGAGEERLHDRLWLHS
        FHFYRDGERVDEMFGAGEERLHDRLWLHS
Subjt:  FHFYRDGERVDEMFGAGEERLHDRLWLHS

A0A6J1HH85 thioredoxin-like 3-34.4e-5786.82Show/hide
Query:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT
        MED EKKGLEG GLD  VNRHGNLKSASSDQDFKDVLLQIKSSKTT   V+++    CRVCSQILPAFCRLSNNFPK+SFIYADIDECPETT+HIRYTPT
Subjt:  MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPT

Query:  FHFYRDGERVDEMFGAGEERLHDRLWLHS
        FHFYRDGERVDEMFG GEERLHDRLWLHS
Subjt:  FHFYRDGERVDEMFGAGEERLHDRLWLHS

SwissProt top hitse value%identityAlignment
G4NFB7 Thioredoxin-24.5e-1135.83Show/hide
Query:  TEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHF---RCRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQ--HIRYTPTF
        T  +G   T   + V+   NL +A   QDFKD L      K+ +FV+V F    C  C  I P     S+ FP + ++  D+DE P+  Q  ++R  PTF
Subjt:  TEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHF---RCRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQ--HIRYTPTF

Query:  HFYRDGERVDEMFGAGEERL
          ++DGE+VDE+ GA   +L
Subjt:  HFYRDGERVDEMFGAGEERL

O43396 Thioredoxin-like protein 11.9e-0935.51Show/hide
Query:  LKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPET--TQHIRYTPTFHFYRDGERVDEMFGAGEERL
        +K   SD DF+  L    S   +R  VV F    C  C +I PAF  +SN +P+  F+  D+ +C  T  T +I  TPTF F+R+  R+D+  GA    L
Subjt:  LKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPET--TQHIRYTPTFHFYRDGERVDEMFGAGEERL

Query:  HDRLWLH
         +++  H
Subjt:  HDRLWLH

P85801 Thioredoxin H-type1.3e-1036.78Show/hide
Query:  KSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRL
        ++S+  + V+ +F    C  C QI P +  LS N+P L F+  D+DE  +   +  I+ TPTF F RDG++VD++ GA +  LH ++
Subjt:  KSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRL

Q7XSQ7 Thioredoxin-like 3-31.3e-4569.29Show/hide
Query:  DTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPTFH
        + +K GLEGTGL LP + HGNL+SA SDQ  K +L  +KSSK+    V+++    CRVCSQILP FCR SN F  L+FIYADIDECPETTQ+IRYTPTFH
Subjt:  DTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPTFH

Query:  FYRDGERVDEMFGAGEERLHDRLWLHS
        FYRDGE+VDEM G GEERLHDRLWLHS
Subjt:  FYRDGERVDEMFGAGEERLHDRLWLHS

Q8LCH9 Thioredoxin-like 3-35.7e-3863.49Show/hide
Query:  KKGLEGTGLDL--PVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPTFHF
        K+  EG  L+     N +GN+K A +DQ F  +L  IKSSK+    V+++    C VCSQILPAF +LSN+F KL F+YADIDECPETT+HIRYTPTF F
Subjt:  KKGLEGTGLDL--PVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPTFHF

Query:  YRDGERVDEMFGAGEERLHDRLWLHS
        YRDGE+VDEMFGAGE+RLHDRLWLHS
Subjt:  YRDGERVDEMFGAGEERLHDRLWLHS

Arabidopsis top hitse value%identityAlignment
AT3G08710.1 thioredoxin H-type 99.1e-0726.42Show/hide
Query:  GNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMFGAGEE
        GN+   ++ + + D L +  + +  + VV +F    C  C  + P F  LS     L F+  D+DE  +  ++  I+ TPTF F ++G+++ ++ GA + 
Subjt:  GNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMFGAGEE

Query:  RLHDRL
         L  ++
Subjt:  RLHDRL

AT3G08710.2 thioredoxin H-type 99.1e-0726.42Show/hide
Query:  GNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMFGAGEE
        GN+   ++ + + D L +  + +  + VV +F    C  C  + P F  LS     L F+  D+DE  +  ++  I+ TPTF F ++G+++ ++ GA + 
Subjt:  GNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMFGAGEE

Query:  RLHDRL
         L  ++
Subjt:  RLHDRL

AT3G17880.1 tetraticopeptide domain-containing thioredoxin1.2e-0628.89Show/hide
Query:  SSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRLWLHS
        + K +R ++++F    C  C  + P +  L+    ++ F+  DID+  +   + +I   PTF F RDG+ VD++ GA +  L  ++  HS
Subjt:  SSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRLWLHS

AT3G17880.2 tetraticopeptide domain-containing thioredoxin1.2e-0628.89Show/hide
Query:  SSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRLWLHS
        + K +R ++++F    C  C  + P +  L+    ++ F+  DID+  +   + +I   PTF F RDG+ VD++ GA +  L  ++  HS
Subjt:  SSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRLWLHS

AT3G53220.1 Thioredoxin superfamily protein4.0e-3963.49Show/hide
Query:  KKGLEGTGLDL--PVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPTFHF
        K+  EG  L+     N +GN+K A +DQ F  +L  IKSSK+    V+++    C VCSQILPAF +LSN+F KL F+YADIDECPETT+HIRYTPTF F
Subjt:  KKGLEGTGLDL--PVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFR---CRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPTFHF

Query:  YRDGERVDEMFGAGEERLHDRLWLHS
        YRDGE+VDEMFGAGE+RLHDRLWLHS
Subjt:  YRDGERVDEMFGAGEERLHDRLWLHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACACGGAGAAGAAGGGTCTAGAAGGCACTGGTTTGGATCTGCCAGTCAATCGCCATGGTAACTTGAAGAGCGCTTCCAGCGATCAAGACTTTAAGGACGTTCT
TCTTCAAATCAAGTCCTCCAAAACCACTAGGTTTGTTGTTGTTCATTTCAGGTGTCGTGTGTGCAGCCAGATTCTTCCAGCTTTCTGTCGGCTGAGTAACAATTTTCCAA
AGCTTTCTTTCATCTATGCAGATATTGATGAATGCCCAGAAACAACTCAACACATTCGTTACACCCCGACGTTTCATTTCTATCGCGACGGTGAAAGAGTGGACGAGATG
TTTGGTGCCGGGGAAGAACGGTTGCACGACAGGTTGTGGTTGCACTCC
mRNA sequenceShow/hide mRNA sequence
ATGGAGGACACGGAGAAGAAGGGTCTAGAAGGCACTGGTTTGGATCTGCCAGTCAATCGCCATGGTAACTTGAAGAGCGCTTCCAGCGATCAAGACTTTAAGGACGTTCT
TCTTCAAATCAAGTCCTCCAAAACCACTAGGTTTGTTGTTGTTCATTTCAGGTGTCGTGTGTGCAGCCAGATTCTTCCAGCTTTCTGTCGGCTGAGTAACAATTTTCCAA
AGCTTTCTTTCATCTATGCAGATATTGATGAATGCCCAGAAACAACTCAACACATTCGTTACACCCCGACGTTTCATTTCTATCGCGACGGTGAAAGAGTGGACGAGATG
TTTGGTGCCGGGGAAGAACGGTTGCACGACAGGTTGTGGTTGCACTCC
Protein sequenceShow/hide protein sequence
MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTRFVVVHFRCRVCSQILPAFCRLSNNFPKLSFIYADIDECPETTQHIRYTPTFHFYRDGERVDEM
FGAGEERLHDRLWLHS