; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015813 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015813
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranscription factor, Myb superfamily
Genome locationscaffold943_2:127912..128751
RNA-Seq ExpressionMS015813
SyntenyMS015813
Gene Ontology termsGO:0010597 - green leaf volatile biosynthetic process (biological process)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RAL37498.1 hypothetical protein DM860_000192 [Cuscuta australis]5.1e-5578.46Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKASVK+GPWSPEEDAKL+  IH +GTGGNWI+LP KA            GLKRCGKSCRLRWLNYLRPNIKHG FS  EDRIIC+LF  IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKNHWNTKLKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

TVU10702.1 hypothetical protein EJB05_44246, partial [Eragrostis curvula]2.3e-5579.23Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKASVK+GPWSPEED  L+++IHN+GTGGNWISLP KA            GLKRCGKSCRLRWLNYLRPNIKHG FS  EDRIICSLF  IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKN+WNTKLKKKLM
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

VFR03446.1 unnamed protein product [Cuscuta campestris]5.1e-5578.46Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKASVK+GPWSPEEDAKL+  IH +GTGGNWI+LP KA            GLKRCGKSCRLRWLNYLRPNIKHG FS  EDRIIC+LF  IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKNHWNTKLKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

XP_022143880.1 transcription factor RAX2-like [Momordica charantia]2.1e-6490.08Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKA            GL+RCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLMM
        RWSIIAAQLPGRTDNEIKNHWNTKLKKKLMM
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLMM

XP_038882300.1 transcription factor RAX2-like [Benincasa hispida]2.3e-5579.23Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGR+PCCDKASVK+GPWSPEEDAKL+QHIHN GTGGNWISLP +A            GLKRCGKSCRLRWLNYLRP+IKHG F+  EDRIICSLF  IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKN+WNTKLKKKLM
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

TrEMBL top hitse value%identityAlignment
A0A0H4LI12 R2R3 type MYB153.2e-5577.86Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKA+VK+GPWSPEEDAKL+ +I  FGTGGNWI+LP KA            GLKRCGKSCRLRWLNYLRPNIKHG FS  EDRIICSL+ +IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLMM
        RWSIIAAQLPGRTDN+IKN+WNTKLKKKLMM
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLMM

A0A328CYI4 Uncharacterized protein2.5e-5578.46Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKASVK+GPWSPEEDAKL+  IH +GTGGNWI+LP KA            GLKRCGKSCRLRWLNYLRPNIKHG FS  EDRIIC+LF  IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKNHWNTKLKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

A0A484NQD3 Uncharacterized protein2.5e-5578.46Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKASVK+GPWSPEEDAKL+  IH +GTGGNWI+LP KA            GLKRCGKSCRLRWLNYLRPNIKHG FS  EDRIIC+LF  IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKNHWNTKLKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

A0A5J9THD2 Uncharacterized protein (Fragment)1.1e-5579.23Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKASVK+GPWSPEED  L+++IHN+GTGGNWISLP KA            GLKRCGKSCRLRWLNYLRPNIKHG FS  EDRIICSLF  IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKN+WNTKLKKKLM
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

A0A6J1CQ16 transcription factor RAX2-like1.0e-6490.08Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKA            GL+RCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLMM
        RWSIIAAQLPGRTDNEIKNHWNTKLKKKLMM
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLMM

SwissProt top hitse value%identityAlignment
F4JSU0 Transcription factor MYB878.8e-5067.69Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDK +VK+GPWS EEDA L+ +I   GTG NWISLP +             G+KRCGKSCRLRWLNYLRPN+KHG F+  ED IICSL+  IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIA+QLPGRTDN+IKN+WNT+LKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

Q9FG68 Transcription factor RAX11.7e-5373.85Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDK  VKRGPWSPEED+KLR +I  +G GGNWIS P KA            GL+RCGKSCRLRWLNYLRPNIKHG FS  EDRII SLF AIGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAA LPGRTDN+IKN+WNTKL+KKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

Q9FKL2 Transcription factor MYB365.9e-5473.85Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKA+VK+GPWSPEED KL+ +I  +GTGGNWI+LP K             GLKRCGKSCRLRWLNYLRPNIKHG FS  EDRII SL+ +IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKN+WNTKLKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

Q9M2Y9 Transcription factor RAX33.5e-5473.85Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKA+VK+GPWSPEEDAKL+ +I N GTGGNWI+LP K             GLKRCGKSCRLRWLNYLRPNIKHG FS  E+ IICSL+  IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKN+WNT+LKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

Q9SJL7 Transcription factor RAX29.4e-5271.54Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKA+VKRGPWSPEEDAKL+ +I   GTGGNWI+LP KA            GL+RCGKSCRLRWLNYLRPNI+HG F+  ED II SLF +IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWS+IAA L GRTDN+IKN+WNTKLKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

Arabidopsis top hitse value%identityAlignment
AT2G36890.1 Duplicated homeodomain-like superfamily protein6.7e-5371.54Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKA+VKRGPWSPEEDAKL+ +I   GTGGNWI+LP KA            GL+RCGKSCRLRWLNYLRPNI+HG F+  ED II SLF +IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWS+IAA L GRTDN+IKN+WNTKLKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

AT3G49690.1 myb domain protein 842.5e-5573.85Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKA+VK+GPWSPEEDAKL+ +I N GTGGNWI+LP K             GLKRCGKSCRLRWLNYLRPNIKHG FS  E+ IICSL+  IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKN+WNT+LKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

AT5G23000.1 myb domain protein 371.2e-5473.85Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDK  VKRGPWSPEED+KLR +I  +G GGNWIS P KA            GL+RCGKSCRLRWLNYLRPNIKHG FS  EDRII SLF AIGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAA LPGRTDN+IKN+WNTKL+KKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

AT5G57620.1 myb domain protein 364.2e-5573.85Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKA+VK+GPWSPEED KL+ +I  +GTGGNWI+LP K             GLKRCGKSCRLRWLNYLRPNIKHG FS  EDRII SL+ +IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKN+WNTKLKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM

AT5G65790.1 myb domain protein 682.5e-5573.08Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS
        MGRAPCCDKA+VK+GPWSPEEDAKL+ +I N GTGGNWI+LP K             GL+RCGKSCRLRWLNYLRPNIKHG FS  ED IIC+L+  IGS
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGS

Query:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM
        RWSIIAAQLPGRTDN+IKN+WNT+LKKKL+
Subjt:  RWSIIAAQLPGRTDNEIKNHWNTKLKKKLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAGCTCCATGCTGTGACAAAGCAAGTGTAAAGAGAGGACCATGGTCTCCTGAAGAAGATGCCAAACTCAGACAACATATTCACAATTTTGGAACTGGAGGCAA
CTGGATTTCCCTCCCTTCCAAAGCTGGTAATTTAATTTTCATCTATATTTTCCTCACTTTTGGTCTTAAGCGATGTGGGAAAAGTTGCAGACTGAGATGGCTCAACTATC
TCAGACCCAACATCAAGCATGGTCATTTCTCTCCTCACGAAGATCGTATCATCTGCTCTCTCTTTACCGCCATCGGAAGCAGGTGGTCGATTATTGCCGCTCAGTTGCCG
GGGCGGACCGACAACGAGATAAAGAATCACTGGAACACGAAGCTGAAGAAGAAGCTAATGATG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAGCTCCATGCTGTGACAAAGCAAGTGTAAAGAGAGGACCATGGTCTCCTGAAGAAGATGCCAAACTCAGACAACATATTCACAATTTTGGAACTGGAGGCAA
CTGGATTTCCCTCCCTTCCAAAGCTGGTAATTTAATTTTCATCTATATTTTCCTCACTTTTGGTCTTAAGCGATGTGGGAAAAGTTGCAGACTGAGATGGCTCAACTATC
TCAGACCCAACATCAAGCATGGTCATTTCTCTCCTCACGAAGATCGTATCATCTGCTCTCTCTTTACCGCCATCGGAAGCAGGTGGTCGATTATTGCCGCTCAGTTGCCG
GGGCGGACCGACAACGAGATAAAGAATCACTGGAACACGAAGCTGAAGAAGAAGCTAATGATG
Protein sequenceShow/hide protein sequence
MGRAPCCDKASVKRGPWSPEEDAKLRQHIHNFGTGGNWISLPSKAGNLIFIYIFLTFGLKRCGKSCRLRWLNYLRPNIKHGHFSPHEDRIICSLFTAIGSRWSIIAAQLP
GRTDNEIKNHWNTKLKKKLMM