; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015819 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015819
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationscaffold943_2:165497..165871
RNA-Seq ExpressionMS015819
SyntenyMS015819
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604402.1 Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5284.8Show/hide
Query:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
        M LRLFI+MLQKSLSPL+SKEP   S DEEF+AAV VPKDVEEGHFVVFA DGDERKRFVINL+ LS+PAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
Subjt:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ

Query:  KILEDRRKQKNGEWVASSVHMITSY
        KI+E+RRKQK GEW+ASSVH+IT Y
Subjt:  KILEDRRKQKNGEWVASSVHMITSY

KAG7034553.1 Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-5284.8Show/hide
Query:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
        M LRLFI+MLQKSLSPL+SKEP   S DEEF+AAV VPKDVEEGHFVVFA DGDERKRFVINL+ LS+PAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
Subjt:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ

Query:  KILEDRRKQKNGEWVASSVHMITSY
        KI+E+RRKQK GEW+ASSVH+IT Y
Subjt:  KILEDRRKQKNGEWVASSVHMITSY

XP_022977263.1 uncharacterized protein LOC111477631 [Cucurbita maxima]1.7e-5284.8Show/hide
Query:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
        M LRLFI+MLQKSLSPL+SKEP   S DEEF+AAV VPKDVEEGHFVVFA DGDERKRFVINL+ LS+PAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
Subjt:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ

Query:  KILEDRRKQKNGEWVASSVHMITSY
        KI+E+RRKQK GEW+ASSVH+IT Y
Subjt:  KILEDRRKQKNGEWVASSVHMITSY

XP_023543955.1 uncharacterized protein LOC111803675 [Cucurbita pepo subsp. pepo]1.7e-5284.8Show/hide
Query:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
        M LRLFI+MLQKSLSPL+SKEP   S DEEF+AAV VPKDVEEGHFVVFA DGDERKRFVINL+ LS+PAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
Subjt:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ

Query:  KILEDRRKQKNGEWVASSVHMITSY
        KI+E+RRKQK GEW+ASSVH+IT Y
Subjt:  KILEDRRKQKNGEWVASSVHMITSY

XP_038881209.1 auxin-responsive protein SAUR71-like [Benincasa hispida]1.1e-5488Show/hide
Query:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
        MML+LFIA+LQKSLSPLLSKE  P S DEEFEAA+TVPKDVEEGHFVVFAVDGDERKRFVINLE LS+P FLRLLELAKEEYGFQQKGALTVPCPPEELQ
Subjt:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ

Query:  KILEDRRKQKNGEWVASSVHMITSY
        KI+E+RRKQK+GEW+ASSVH+ITSY
Subjt:  KILEDRRKQKNGEWVASSVHMITSY

TrEMBL top hitse value%identityAlignment
A0A0A0KEQ9 Uncharacterized protein1.0e-5084.8Show/hide
Query:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
        M LRL IA+LQKSLSPLLSKE    S  EEFEAA TVPKDVEEGHFVVFAVDGDERKRFVINLE LS+P FLRLLELAKEEYGFQQKGALTVPC PEELQ
Subjt:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ

Query:  KILEDRRKQKNGEWVASSVHMITSY
        KI+E+RRKQKNGEW+ASSVH+ITS+
Subjt:  KILEDRRKQKNGEWVASSVHMITSY

A0A2N9I624 Uncharacterized protein5.5e-2862.16Show/hide
Query:  MLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQK
        MLRLFI  LQK LS L  +E +    +EE   A  VP DV EGHF VFA+ G+E KRFV+ L  L+SPAFLRLL+ AKEEYGF QKGALTVPC PEELQK
Subjt:  MLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQK

Query:  ILEDRRKQKNG
        IL+D  ++  G
Subjt:  ILEDRRKQKNG

A0A5A7V9B1 Auxin-responsive protein SAUR40-like4.2e-5285.6Show/hide
Query:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
        M LRL IA+LQKSLSPLLSKEP P S  EEFEAA TVPKDVEEGHFVVFAVDGDERKRFVINLE LS+P FLRLLELAKEEYGFQQKGALTVPC PEELQ
Subjt:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ

Query:  KILEDRRKQKNGEWVASSVHMITSY
        KI+E+RRKQK+GEW+ASSVH+ITS+
Subjt:  KILEDRRKQKNGEWVASSVHMITSY

A0A6J1EC89 uncharacterized protein LOC1114330029.3e-5284Show/hide
Query:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
        M LRLFI+MLQKSLSPL+SKEP   S DEEF AAV VPKDVEEGHFVVFA DGDERKRFVINL+ LS+PAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
Subjt:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ

Query:  KILEDRRKQKNGEWVASSVHMITSY
        KI+E+RRKQK G W+ASSVH+IT Y
Subjt:  KILEDRRKQKNGEWVASSVHMITSY

A0A6J1IPG4 uncharacterized protein LOC1114776318.4e-5384.8Show/hide
Query:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
        M LRLFI+MLQKSLSPL+SKEP   S DEEF+AAV VPKDVEEGHFVVFA DGDERKRFVINL+ LS+PAFLRLLELAKEEYGFQQKGALTVPCPPEELQ
Subjt:  MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQ

Query:  KILEDRRKQKNGEWVASSVHMITSY
        KI+E+RRKQK GEW+ASSVH+IT Y
Subjt:  KILEDRRKQKNGEWVASSVHMITSY

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR408.0e-0838.89Show/hide
Query:  TVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDRR
        TV   V  GH  V    G++++RFV++ ELL+ P F+ LL  + +EYG+ QKG L +PC     ++++E  R
Subjt:  TVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDRR

O65695 Auxin-responsive protein SAUR501.4e-0737.5Show/hide
Query:  AMLQKSLSPLLS-KEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPC
        AML++ L    S  + N G  DE+      +P DV +GHF V+   G+ R R+++ +  L+ P F  LL+ A+EE+GF     LT+PC
Subjt:  AMLQKSLSPLLS-KEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPC

Q9LTV3 Auxin-responsive protein SAUR721.5e-0944.78Show/hide
Query:  VEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDRR
        V EGH  V+   GDE +RFV++ ELL+ P F+ LL  + +EYG++QKG L +PC     ++I+E  R
Subjt:  VEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDRR

Q9SGU2 Auxin-responsive protein SAUR713.2e-0944.78Show/hide
Query:  VEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDRR
        V EGH  V+   G E +RFV+N ELL+ P F+ LL+ + +EYG++Q+G L +PC     ++ILE  R
Subjt:  VEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDRR

Q9ZUZ3 Auxin-responsive protein SAUR322.7e-0837.18Show/hide
Query:  KDVEEGHFVV-FAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEE---LQKILEDRRKQKNG
        KDV +G   +     G+E++RF++ +   + P F++LL+ A++EYGF QKG +T+PC  EE   +Q +++  R   NG
Subjt:  KDVEEGHFVV-FAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEE---LQKILEDRRKQKNG

Arabidopsis top hitse value%identityAlignment
AT2G28085.1 SAUR-like auxin-responsive protein family3.1e-1555.56Show/hide
Query:  VPKDVEEGHFVVFAVDG--DERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDR
        VPKDV+EGHF V AVDG  +  +RFV+ L  L  P F +LLE A+EEYGF   GAL VPC P  L+ IL ++
Subjt:  VPKDVEEGHFVVFAVDG--DERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDR

AT3G09870.1 SAUR-like auxin-responsive protein family2.2e-2158.02Show/hide
Query:  DEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDRRK
        +EE  AA  +P DV+EGH  V AV G+  KRFV+ LE L+ P FLRLLE A+EE+GFQ +G LT+PC PEE+QKIL+  R+
Subjt:  DEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDRRK

AT3G12830.1 SAUR-like auxin-responsive protein family1.0e-1044.78Show/hide
Query:  VEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDRR
        V EGH  V+   GDE +RFV++ ELL+ P F+ LL  + +EYG++QKG L +PC     ++I+E  R
Subjt:  VEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDRR

AT5G20810.1 SAUR-like auxin-responsive protein family1.3e-1038.78Show/hide
Query:  IAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILE
        +AM+  +++  L    N G  DEE   +   P DV +G+  V+   G E +RF+I    LS   F  LLE A+EE+GF Q GALT+PC  E  + +L+
Subjt:  IAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILE

AT5G20810.2 SAUR-like auxin-responsive protein family1.3e-1038.78Show/hide
Query:  IAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILE
        +AM+  +++  L    N G  DEE   +   P DV +G+  V+   G E +RF+I    LS   F  LLE A+EE+GF Q GALT+PC  E  + +L+
Subjt:  IAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTAAGGTTATTCATCGCTATGCTCCAAAAGAGCCTCTCTCCACTGCTATCTAAAGAACCTAACCCTGGAAGTTTGGATGAAGAATTCGAAGCAGCAGTTACGGT
ACCAAAAGACGTGGAAGAAGGCCATTTTGTGGTGTTTGCAGTGGATGGTGATGAAAGAAAGAGATTTGTCATTAATTTGGAGTTATTGTCTAGCCCTGCATTCTTGAGGC
TATTGGAGCTGGCTAAGGAAGAATATGGATTCCAACAAAAGGGAGCTCTAACAGTCCCTTGTCCACCCGAGGAACTACAGAAGATTTTAGAAGACAGAAGAAAACAGAAA
AATGGGGAGTGGGTTGCATCTAGTGTTCATATGATAACTAGTTAT
mRNA sequenceShow/hide mRNA sequence
ATGATGCTAAGGTTATTCATCGCTATGCTCCAAAAGAGCCTCTCTCCACTGCTATCTAAAGAACCTAACCCTGGAAGTTTGGATGAAGAATTCGAAGCAGCAGTTACGGT
ACCAAAAGACGTGGAAGAAGGCCATTTTGTGGTGTTTGCAGTGGATGGTGATGAAAGAAAGAGATTTGTCATTAATTTGGAGTTATTGTCTAGCCCTGCATTCTTGAGGC
TATTGGAGCTGGCTAAGGAAGAATATGGATTCCAACAAAAGGGAGCTCTAACAGTCCCTTGTCCACCCGAGGAACTACAGAAGATTTTAGAAGACAGAAGAAAACAGAAA
AATGGGGAGTGGGTTGCATCTAGTGTTCATATGATAACTAGTTAT
Protein sequenceShow/hide protein sequence
MMLRLFIAMLQKSLSPLLSKEPNPGSLDEEFEAAVTVPKDVEEGHFVVFAVDGDERKRFVINLELLSSPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKILEDRRKQK
NGEWVASSVHMITSY