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MS015829 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015829
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHTH myb-type domain-containing protein
Genome locationscaffold943_2:223719..225232
RNA-Seq ExpressionMS015829
SyntenyMS015829
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143737.1 uncharacterized protein LOC111013581 isoform X1 [Momordica charantia]6.7e-36100Show/hide
Query:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG
        MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG
Subjt:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG

XP_022143738.1 uncharacterized protein LOC111013581 isoform X2 [Momordica charantia]6.7e-36100Show/hide
Query:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG
        MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG
Subjt:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG

XP_038881566.1 uncharacterized protein LOC120073047 isoform X1 [Benincasa hispida]1.8e-2885.51Show/hide
Query:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTN
        MDQEVHFCQKFTNMKSHWV+V+G FLPAPLN+ NEVE LLVEPKS+HVLG+CLR QDFSCDF YGIQTN
Subjt:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTN

XP_038881569.1 uncharacterized protein LOC120073047 isoform X3 [Benincasa hispida]1.8e-2885.51Show/hide
Query:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTN
        MDQEVHFCQKFTNMKSHWV+V+G FLPAPLN+ NEVE LLVEPKS+HVLG+CLR QDFSCDF YGIQTN
Subjt:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTN

XP_038881570.1 uncharacterized protein LOC120073047 isoform X4 [Benincasa hispida]1.8e-2885.51Show/hide
Query:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTN
        MDQEVHFCQKFTNMKSHWV+V+G FLPAPLN+ NEVE LLVEPKS+HVLG+CLR QDFSCDF YGIQTN
Subjt:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTN

TrEMBL top hitse value%identityAlignment
A0A1S3BKX9 uncharacterized protein LOC103491166 isoform X11.5e-2884.51Show/hide
Query:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG
        MDQEVHFCQKFTNMKSHWVKV+G FLPAPLN+ NEVE LLVE KS HVLG+CLR QDFSCDF YGIQTN G
Subjt:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG

A0A1S3BLJ8 uncharacterized protein LOC103491166 isoform X31.5e-2884.51Show/hide
Query:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG
        MDQEVHFCQKFTNMKSHWVKV+G FLPAPLN+ NEVE LLVE KS HVLG+CLR QDFSCDF YGIQTN G
Subjt:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG

A0A1S3BLK0 uncharacterized protein LOC103491166 isoform X21.5e-2884.51Show/hide
Query:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG
        MDQEVHFCQKFTNMKSHWVKV+G FLPAPLN+ NEVE LLVE KS HVLG+CLR QDFSCDF YGIQTN G
Subjt:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG

A0A6J1CRG2 uncharacterized protein LOC111013581 isoform X23.3e-36100Show/hide
Query:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG
        MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG
Subjt:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG

A0A6J1CRQ1 uncharacterized protein LOC111013581 isoform X13.3e-36100Show/hide
Query:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG
        MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG
Subjt:  MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAGAAGTGCATTTCTGCCAGAAGTTCACAAATATGAAATCTCACTGGGTAAAGGTGGATGGATCTTTTCTTCCTGCACCATTAAATGAACCAAATGAGGTTGA
GCATTTACTTGTGGAGCCCAAAAGCAACCATGTTTTAGGAGATTGCTTGAGAGCTCAAGATTTCTCCTGTGACTTTGACTATGGGATACAAACAAATCGTGGTGATTTCT
TA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAAGAAGTGCATTTCTGCCAGAAGTTCACAAATATGAAATCTCACTGGGTAAAGGTGGATGGATCTTTTCTTCCTGCACCATTAAATGAACCAAATGAGGTTGA
GCATTTACTTGTGGAGCCCAAAAGCAACCATGTTTTAGGAGATTGCTTGAGAGCTCAAGATTTCTCCTGTGACTTTGACTATGGGATACAAACAAATCGTGGTGATTTCT
TA
Protein sequenceShow/hide protein sequence
MDQEVHFCQKFTNMKSHWVKVDGSFLPAPLNEPNEVEHLLVEPKSNHVLGDCLRAQDFSCDFDYGIQTNRGDFL