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MS015832 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015832
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin responsive SAUR protein
Genome locationscaffold943_2:241879..242202
RNA-Seq ExpressionMS015832
SyntenyMS015832
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595237.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]8.5e-5693.52Show/hide
Query:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKG+FIRAC NKWRK+GSKVVPCT CEHCCQWVLWSPLHEDCFIP DVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
Subjt:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ESLFLSVV
        E+LFLSVV
Subjt:  ESLFLSVV

XP_016900724.1 PREDICTED: indole-3-acetic acid-induced protein ARG7 [Cucumis melo]1.3e-5696.26Show/hide
Query:  KGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
        KGRFIRAC NKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIP DVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
Subjt:  KGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE

Query:  SLFLSVV
        +LFLSVV
Subjt:  SLFLSVV

XP_022143895.1 uncharacterized protein LOC111013697 [Momordica charantia]2.8e-59100Show/hide
Query:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
Subjt:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ESLFLSVV
        ESLFLSVV
Subjt:  ESLFLSVV

XP_022963217.1 auxin-induced protein 15A [Cucurbita moschata]8.5e-5693.52Show/hide
Query:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKG+FIRAC NKWRK+GSKVVPCT CEHCCQWVLWSPLHEDCFIP DVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
Subjt:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ESLFLSVV
        E+LFLSVV
Subjt:  ESLFLSVV

XP_038883934.1 auxin-responsive protein SAUR50 [Benincasa hispida]2.7e-5797.2Show/hide
Query:  KGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
        KGRFIRAC NKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIP DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
Subjt:  KGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE

Query:  SLFLSVV
        +LFLSVV
Subjt:  SLFLSVV

TrEMBL top hitse value%identityAlignment
A0A1S4DXL1 indole-3-acetic acid-induced protein ARG76.4e-5796.26Show/hide
Query:  KGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
        KGRFIRAC NKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIP DVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE
Subjt:  KGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDE

Query:  SLFLSVV
        +LFLSVV
Subjt:  SLFLSVV

A0A2I4H5T8 auxin-responsive protein SAUR503.9e-4678.7Show/hide
Query:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKG+ +RAC NKWRK  SKVVPC ACE+CCQWVLW P+ E+  IP DVPKGHLVVYVGEN +RFVIKI++LNHP FKALLDQAQDE+DFT +SKLCIPCD
Subjt:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ESLFLSVV
        ESLFLSVV
Subjt:  ESLFLSVV

A0A6J1CQ37 uncharacterized protein LOC1110136971.4e-59100Show/hide
Query:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
Subjt:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ESLFLSVV
        ESLFLSVV
Subjt:  ESLFLSVV

A0A6J1HEL5 auxin-induced protein 15A4.1e-5693.52Show/hide
Query:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKG+FIRAC NKWRK+GSKVVPCT CEHCCQWVLWSPLHEDCFIP DVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
Subjt:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ESLFLSVV
        E+LFLSVV
Subjt:  ESLFLSVV

A0A6J1I941 auxin-induced protein 15A-like9.2e-5692.59Show/hide
Query:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKG+FIRAC NKWRK+GSKVVPCT CEHCCQWVLWSPLHEDCFIP DVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFT+NSKLCIPCD
Subjt:  MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ESLFLSVV
        E+LFLSVV
Subjt:  ESLFLSVV

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR507.6e-1555.38Show/hide
Query:  EDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLF
        EDC +P DVPKGH  VYVGEN  R+++ IS L HP F++LL +A++EF F  +  L IPCDE +F
Subjt:  EDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLF

P0DKL1 Auxin-responsive protein SAUR503.8e-1448.53Show/hide
Query:  HEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLFLS
        ++D  +P+DVPKGH VVYVGE   R+++ IS L+HP F+ LL ++++EF F  +  + IPC E  FLS
Subjt:  HEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLFLS

P32295 Indole-3-acetic acid-induced protein ARG71.7e-1157.63Show/hide
Query:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDESLF
        D PKG+L VYVGEN +RFVI +S LN PLF+ LL QA++EF +      L IPC E LF
Subjt:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDESLF

P33080 Auxin-induced protein X10A1.1e-1053.23Show/hide
Query:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDESLFLSV
        +VPKG+LVVYVG+  RRF+I +S LN P F+ LL+QA++EF +      L IPC E  FL+V
Subjt:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDESLFLSV

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 102.7e-1249.23Show/hide
Query:  IPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLFLSVV
        +P DVPKGH  VYVG N  R+++ IS L+H  F+ LL  A++EF F  +  L IPCDE  F S++
Subjt:  IPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLFLSVV

Arabidopsis top hitse value%identityAlignment
AT2G21220.1 SAUR-like auxin-responsive protein family9.2e-1644.87Show/hide
Query:  CQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLFLSV
        C  +  +  +++  +P DVPKGH  VYVGE   R+++ IS L HP FK+LL QA++EF F  +  L IPC+E +F S+
Subjt:  CQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLFLSV

AT2G37030.1 SAUR-like auxin-responsive protein family3.1e-3258.72Show/hide
Query:  MKGRFIRACVNKWRKIGSKV-VPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
        MK +FI++C  K +K+ SKV +PC +CE C + + W+   E   IP DVPKGHLVVYVGE  +RFVI I+LL HPLF+ALLDQAQD + F+A+S+L IPC
Subjt:  MKGRFIRACVNKWRKIGSKV-VPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC

Query:  DESLFLSVV
        +ES FL VV
Subjt:  DESLFLSVV

AT3G53250.1 SAUR-like auxin-responsive protein family1.7e-2558.33Show/hide
Query:  KIGSKVVPC--TACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLFLSVV
        K  S V+PC  ++CE CC  V W    E+  IP DVP+GHLVVYVG++ +RFVIK+SLL HP+FKALLDQAQD ++   +S+L IPCDE+ FL VV
Subjt:  KIGSKVVPC--TACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLFLSVV

AT4G34760.1 SAUR-like auxin-responsive protein family5.4e-1655.38Show/hide
Query:  EDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLF
        EDC +P DVPKGH  VYVGEN  R+++ IS L HP F++LL +A++EF F  +  L IPCDE +F
Subjt:  EDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLF

AT5G03310.1 SAUR-like auxin-responsive protein family2.0e-1866.2Show/hide
Query:  IPSDVPKGHLVVYVG---ENNRRFVIKISLLNHPLFKALLDQAQDEF--DFTA-NSKLCIPCDESLFLSVV
        IP DVPKGHLVVYVG   E  +RFVIKI+LL+ P+F+ALLDQ++DE   DFT+ +SKLCI CDE+LFL V+
Subjt:  IPSDVPKGHLVVYVG---ENNRRFVIKISLLNHPLFKALLDQAQDEF--DFTA-NSKLCIPCDESLFLSVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGCAGGTTTATAAGAGCATGTGTAAACAAATGGAGGAAGATAGGAAGCAAAGTTGTACCTTGTACAGCCTGCGAGCACTGTTGCCAATGGGTTTTGTGGTCTCC
CTTGCATGAGGATTGCTTCATTCCGAGTGACGTCCCGAAAGGTCACTTGGTTGTCTATGTAGGTGAGAATAACAGAAGGTTTGTAATCAAGATCAGCCTTCTCAATCACC
CTCTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGACTTCACTGCAAACTCAAAACTCTGCATTCCTTGTGATGAGAGCCTTTTCCTTAGTGTTGTC
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGCAGGTTTATAAGAGCATGTGTAAACAAATGGAGGAAGATAGGAAGCAAAGTTGTACCTTGTACAGCCTGCGAGCACTGTTGCCAATGGGTTTTGTGGTCTCC
CTTGCATGAGGATTGCTTCATTCCGAGTGACGTCCCGAAAGGTCACTTGGTTGTCTATGTAGGTGAGAATAACAGAAGGTTTGTAATCAAGATCAGCCTTCTCAATCACC
CTCTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGACTTCACTGCAAACTCAAAACTCTGCATTCCTTGTGATGAGAGCCTTTTCCTTAGTGTTGTC
Protein sequenceShow/hide protein sequence
MKGRFIRACVNKWRKIGSKVVPCTACEHCCQWVLWSPLHEDCFIPSDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDESLFLSVV