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MS015855 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015855
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold943_2:456991..457158
RNA-Seq ExpressionMS015855
SyntenyMS015855
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604438.1 hypothetical protein SDJN03_05047, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1274.07Show/hide
Query:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSP
        SENG M  SSEVYEIDYRGPETHSSH SPP H+SHGRPWI+HH+   H L+P P
Subjt:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSP

XP_022143835.1 uncharacterized protein LOC111013652 [Momordica charantia]3.4e-2498.21Show/hide
Query:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSPNS
        SENGAMEISSEVYEIDYRGPETHSSHFSPPDH+SHGRPWIIHHQPKLHSLNPSPNS
Subjt:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSPNS

XP_022925989.1 uncharacterized protein LOC111433241 [Cucurbita moschata]1.8e-1274.07Show/hide
Query:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSP
        SENG M  SSEVYEIDYRGPETHSSH SPP H+SHGRPWI+HH+   H L+P P
Subjt:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSP

XP_023543089.1 uncharacterized protein LOC111803061 [Cucurbita pepo subsp. pepo]8.7e-1274.07Show/hide
Query:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSP
        SENG M  SSEVYEIDYRGPETHSSH SPP H SHGRPWI+HH    H L+P P
Subjt:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSP

XP_038881428.1 uncharacterized protein LOC120072958 [Benincasa hispida]7.4e-1165.62Show/hide
Query:  SENGAMEI-----SSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHH-----QPKLHSLNPSP
        SENG M+      SSEVYEIDYRGPETHSSH SPPDH SHGRPWI HH     QPK     P P
Subjt:  SENGAMEI-----SSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHH-----QPKLHSLNPSP

TrEMBL top hitse value%identityAlignment
A0A0A0KIB6 Uncharacterized protein1.1e-0764.06Show/hide
Query:  SENGAMEISSEVYEIDYRGPETHSS-HFSPPDHYSHG-RPWIIHH------QPKL-HSLNPSPN
        SEN    I   VYEIDYRGPETHSS H SPPDH SHG RPWIIHH      QPK  +SL+P+P+
Subjt:  SENGAMEISSEVYEIDYRGPETHSS-HFSPPDHYSHG-RPWIIHH------QPKL-HSLNPSPN

A0A5A7U1B9 Putative transmembrane protein2.4e-0771.7Show/hide
Query:  VYEIDYRGPETHSS-HFSPPDHYSHG-RPWIIHH------QPK--LHSLNPSP
        VYEIDYRGPETHSS H SPPDH SHG RPWIIHH      QPK   +SLNP+P
Subjt:  VYEIDYRGPETHSS-HFSPPDHYSHG-RPWIIHH------QPK--LHSLNPSP

A0A6J1CPX6 uncharacterized protein LOC1110136521.7e-2498.21Show/hide
Query:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSPNS
        SENGAMEISSEVYEIDYRGPETHSSHFSPPDH+SHGRPWIIHHQPKLHSLNPSPNS
Subjt:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSPNS

A0A6J1EDR4 uncharacterized protein LOC1114332418.5e-1374.07Show/hide
Query:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSP
        SENG M  SSEVYEIDYRGPETHSSH SPP H+SHGRPWI+HH+   H L+P P
Subjt:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSP

A0A6J1IQ06 uncharacterized protein LOC1114788853.0e-1070.37Show/hide
Query:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSP
        SENG +  SS+VYEIDYRGPETHSSH SPP H SHGRPWI+HH    H L+P P
Subjt:  SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G03120.1 unknown protein1.2e-0660Show/hide
Query:  GAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHH
        G+ +  SEVYEIDYRGPETH+S   PP    HG+P  IHH
Subjt:  GAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTGAAAATGGGGCCATGGAAATTTCTTCAGAGGTTTATGAAATAGACTATAGAGGACCAGAAACTCACTCATCTCATTTTTCTCCACCTGATCACTACTCCCATGGAAG
GCCTTGGATTATTCACCATCAACCTAAATTACACTCTCTCAACCCTTCTCCAAACTCA
mRNA sequenceShow/hide mRNA sequence
TCTGAAAATGGGGCCATGGAAATTTCTTCAGAGGTTTATGAAATAGACTATAGAGGACCAGAAACTCACTCATCTCATTTTTCTCCACCTGATCACTACTCCCATGGAAG
GCCTTGGATTATTCACCATCAACCTAAATTACACTCTCTCAACCCTTCTCCAAACTCA
Protein sequenceShow/hide protein sequence
SENGAMEISSEVYEIDYRGPETHSSHFSPPDHYSHGRPWIIHHQPKLHSLNPSPNS