; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015857 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015857
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S11, chloroplastic
Genome locationscaffold943_2:471433..471588
RNA-Seq ExpressionMS015857
SyntenyMS015857
Gene Ontology termsGO:0009536 - plastid (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QHN53629.1 ribosomal protein S11 [Parietaria debilis]9.6e-0557.69Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S + RH+SSRKNTR I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

QQK90347.1 ribosomal protein S11 [Ulmus pumila]9.6e-0557.69Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S + RHISSRKN R I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

QZL13240.1 ribosomal protein S11 [Primula violaris]9.6e-0557.69Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  M S R  HI SRKNTR I   VIH+Q SFNNTI+T+T VR R++S
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

YP_009336064.1 ribosomal protein S11 [Ulmus davidiana]9.6e-0557.69Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S + RHISSRKN R I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

YP_009650942.1 ribosomal protein S11 [Hydnocarpus hainanensis]9.6e-0557.69Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M KL+  + S +  HISSRKNTR I   VIH+Q SFNNTI+T+T VR ++IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

TrEMBL top hitse value%identityAlignment
A0A1L5YDF3 30S ribosomal protein S11, chloroplastic4.6e-0557.69Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S + RHISSRKN R I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

A0A1L5YDN1 30S ribosomal protein S11, chloroplastic4.6e-0557.69Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S + RHISSRKN R I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

A0A1L5YDS9 30S ribosomal protein S11, chloroplastic4.6e-0557.69Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S + RHISSRKN R I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

A0A1L5YE24 30S ribosomal protein S11, chloroplastic4.6e-0557.69Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S + RHISSRKN R I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

A0A6B9TV57 30S ribosomal protein S11, chloroplastic4.6e-0557.69Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S + RH+SSRKNTR I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

SwissProt top hitse value%identityAlignment
A4GYU4 30S ribosomal protein S11, chloroplastic1.4e-0655.77Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M KL+  + S +   ISSRKN R I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

B1NWI3 30S ribosomal protein S11, chloroplastic5.3e-0655.77Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S R   I SRKN+R I   VIH+Q SFNNTI+TIT VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

Q09WY4 30S ribosomal protein S11, chloroplastic1.1e-0653.85Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S + RH+ SRKN R I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

Q14FC4 30S ribosomal protein S11, chloroplastic1.4e-0655.77Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M KL+  + S +   ISSRKN R I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

Q4VZK2 30S ribosomal protein S11, chloroplastic5.3e-0655.77Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S R   ISSRK+TR I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS

Arabidopsis top hitse value%identityAlignment
ATCG00750.1 ribosomal protein S111.2e-0550Show/hide
Query:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS
        M K +  + S +     SRKN R I   VIH+Q SFNNTI+T+T VR R+IS
Subjt:  MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAACTCATGTCAATAATGGATTCATGTAGAAAGAGACATATTAGCTCGCGTAAAAATACACGTGGAATAATCAATGACGTTATTCATATTCAAACAAGTTTCAA
CAATACAATTATGACTATTACATGTGTACGAAGTCGGATAATTTCT
mRNA sequenceShow/hide mRNA sequence
ATGACAAAACTCATGTCAATAATGGATTCATGTAGAAAGAGACATATTAGCTCGCGTAAAAATACACGTGGAATAATCAATGACGTTATTCATATTCAAACAAGTTTCAA
CAATACAATTATGACTATTACATGTGTACGAAGTCGGATAATTTCT
Protein sequenceShow/hide protein sequence
MTKLMSIMDSCRKRHISSRKNTRGIINDVIHIQTSFNNTIMTITCVRSRIIS