CuGenDBv2

Gene ID	MS015871
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Zinc finger CCHC domain-containing protein 10
Genome location	scaffold943_2:572474..573404
RNA-Seq Expression	MS015871
Synteny	MS015871
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022143889.1 uncharacterized protein LOC111013694 isoform X1 [Momordica charantia]

2.1e-115

100

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Query:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
        MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
Subjt:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE

Query:  SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASRESRAMKP
        SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASRESRAMKP
Subjt:  SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASRESRAMKP

Query:  TAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMS
        TAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMS
Subjt:  TAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMS

XP_022143893.1 uncharacterized protein LOC111013694 isoform X2 [Momordica charantia]

7.6e-73

100

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Query:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
        MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
Subjt:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE

Query:  SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS
        SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS
Subjt:  SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS

XP_022972763.1 uncharacterized protein LOC111471273 [Cucurbita maxima]

4.2e-63

66.67

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Query:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
        ME GEGL TL+CLRGRLLAERQASRSAKEEAE MG+K+IELENQIRKETE RNKAE+RLKLL+KKLESLNIAS SV SENS S+EISTNSSATKET+ QE
Subjt:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE

Query:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR
        SRSE        N+ EK    I       ++K NQ +PD+ NSSPN++SPNNS TDPHR  QIS+ + QSFS E KERE EHYID   AS PGA PAA++
Subjt:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR

Query:  ESRAMKPTAIIQERARDVHDGVKH--VRGNVQSSFERRNHMKAIMS
            MK    I ER  DV D VK   +RGNVQ  FERRN MKAIMS
Subjt:  ESRAMKPTAIIQERARDVHDGVKH--VRGNVQSSFERRNHMKAIMS

XP_038881375.1 uncharacterized protein LOC120072916 isoform X1 [Benincasa hispida]

7.8e-70

72.43

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Query:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
        ME G+GL TL+CLRGRLLAERQASRSAKEEAE MG+K+++LENQIRKETELRNKAEKRLKLLIKKLESLNIAS SV SE ST SEISTNSS  KETE QE
Subjt:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE

Query:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR
        SRSE       E Q EK V DI   KQRDE K N+NAPD+ NSS N+ES NNS  DPHR SQI + +D+SFSVE + +E+EHYIDN VASVPGA PAA+ 
Subjt:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR

Query:  ESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIM
        E+RAMK    I ERA +VHD +KH+RGNVQSSFE RNHMKAIM
Subjt:  ESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIM

XP_038881376.1 uncharacterized protein LOC120072916 isoform X2 [Benincasa hispida]

7.8e-70

72.43

Show/hide

Query:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
        ME G+GL TL+CLRGRLLAERQASRSAKEEAE MG+K+++LENQIRKETELRNKAEKRLKLLIKKLESLNIAS SV SE ST SEISTNSS  KETE QE
Subjt:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE

Query:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR
        SRSE       E Q EK V DI   KQRDE K N+NAPD+ NSS N+ES NNS  DPHR SQI + +D+SFSVE + +E+EHYIDN VASVPGA PAA+ 
Subjt:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR

Query:  ESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIM
        E+RAMK    I ERA +VHD +KH+RGNVQSSFE RNHMKAIM
Subjt:  ESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIM

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BHR6 uncharacterized protein LOC103489769

3.4e-63

65.57

Show/hide

Query:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
        M+  +GL TL+CLRGRLLAERQASRSAKEEAE MG+K+++LENQIRKETELRNKAEKRL+LLIKKLESLN AS SV    ST+SEISTNSS +KETE QE
Subjt:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE

Query:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR
         +SE       ENQ +K + +I   KQ DE K N+N PD+ NS PN+ESPNN   DP   S+I  ++DQSFSVE+KER  +HYIDN   SVPGA P A+ 
Subjt:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR

Query:  ESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMS
        E+ AMK    I ERA +VHD +KH+RGNVQSSFERRNHMKAI+S
Subjt:  ESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMS

A0A5A7TZE9 Zinc finger CCHC domain-containing protein 10

3.4e-63

65.57

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Query:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
        M+  +GL TL+CLRGRLLAERQASRSAKEEAE MG+K+++LENQIRKETELRNKAEKRL+LLIKKLESLN AS SV    ST+SEISTNSS +KETE QE
Subjt:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE

Query:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR
         +SE       ENQ +K + +I   KQ DE K N+N PD+ NS PN+ESPNN   DP   S+I  ++DQSFSVE+KER  +HYIDN   SVPGA P A+ 
Subjt:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR

Query:  ESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMS
        E+ AMK    I ERA +VHD +KH+RGNVQSSFERRNHMKAI+S
Subjt:  ESRAMKPTAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMS

A0A6J1CRU4 uncharacterized protein LOC111013694 isoform X2

3.7e-73

100

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Query:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
        MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
Subjt:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE

Query:  SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS
        SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS
Subjt:  SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQS

A0A6J1CS61 uncharacterized protein LOC111013694 isoform X1

1.0e-115

100

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Query:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
        MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
Subjt:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE

Query:  SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASRESRAMKP
        SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASRESRAMKP
Subjt:  SRSEENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASRESRAMKP

Query:  TAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMS
        TAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMS
Subjt:  TAIIQERARDVHDGVKHVRGNVQSSFERRNHMKAIMS

A0A6J1IB17 uncharacterized protein LOC111471273

2.0e-63

66.67

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Query:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE
        ME GEGL TL+CLRGRLLAERQASRSAKEEAE MG+K+IELENQIRKETE RNKAE+RLKLL+KKLESLNIAS SV SENS S+EISTNSSATKET+ QE
Subjt:  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQE

Query:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR
        SRSE        N+ EK    I       ++K NQ +PD+ NSSPN++SPNNS TDPHR  QIS+ + QSFS E KERE EHYID   AS PGA PAA++
Subjt:  SRSE-------ENQSEKAVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASR

Query:  ESRAMKPTAIIQERARDVHDGVKH--VRGNVQSSFERRNHMKAIMS
            MK    I ER  DV D VK   +RGNVQ  FERRN MKAIMS
Subjt:  ESRAMKPTAIIQERARDVHDGVKH--VRGNVQSSFERRNHMKAIMS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G37300.1 unknown protein

9.1e-16

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Query:  EGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNS----SATKETE
        E  EG  T++CLRGRLLAERQ SRSAKEEAE + +KM ELE  +++E  LR KAEKRLKLL+KKLE +     S  SE S+SSE+S  S    SA+KE E
Subjt:  EGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNS----SATKETE

Query:  DQESRS---EENQSEKAVPDIAAPKQRD
        ++   S   +E +++ A  ++A+ ++ D
Subjt:  DQESRS---EENQSEKAVPDIAAPKQRD

AT2G37300.2 unknown protein

9.1e-16

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Query:  EGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNS----SATKETE
        E  EG  T++CLRGRLLAERQ SRSAKEEAE + +KM ELE  +++E  LR KAEKRLKLL+KKLE +     S  SE S+SSE+S  S    SA+KE E
Subjt:  EGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNS----SATKETE

Query:  DQESRS---EENQSEKAVPDIAAPKQRD
        ++   S   +E +++ A  ++A+ ++ D
Subjt:  DQESRS---EENQSEKAVPDIAAPKQRD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGGAGGGGAGGGTTTGATAACTTTAGACTGCTTAAGAGGAAGATTACTTGCAGAGAGACAAGCTTCAAGGTCAGCCAAAGAGGAGGCAGAGTTCATGGGGAAGAA
GATGATAGAGTTGGAGAATCAGATTAGAAAGGAGACAGAGCTAAGGAACAAAGCTGAGAAGAGGCTTAAACTCTTGATAAAGAAGCTTGAATCCCTCAACATTGCTTCAA
TATCAGTGATCTCAGAGAACTCAACTTCATCAGAAATTTCCACAAACTCTTCAGCCACAAAAGAAACAGAAGATCAAGAATCGAGATCAGAAGAAAATCAAAGCGAGAAA
GCTGTTCCAGATATCGCCGCACCAAAACAGCGCGATGAGGATAAAACTAATCAGAATGCTCCAGATCAAACCAATTCAAGCCCTAACACCGAATCTCCCAACAATTCCTG
CACCGATCCCCACCGATACTCTCAAATCTCCCGGAGCAGAGATCAAAGTTTTTCAGTAGAATTAAAGGAGAGAGAGAAGGAGCATTACATAGATAATCCGGTAGCGTCGG
TCCCCGGAGCGGTGCCGGCGGCGAGTAGAGAGAGCAGAGCGATGAAGCCGACGGCAATAATCCAAGAAAGAGCGAGAGATGTTCACGATGGTGTGAAGCACGTCAGAGGA
AATGTCCAGAGCTCATTCGAGAGAAGAAATCACATGAAAGCCATAATGAGT

mRNA sequence

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Protein sequence

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MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLKLLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQESRSEENQSEK
AVPDIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSFSVELKEREKEHYIDNPVASVPGAVPAASRESRAMKPTAIIQERARDVHDGVKHVRG
NVQSSFERRNHMKAIMS

MS015871 (gene) of Bitter gourd (TR) v1 genome