; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015872 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015872
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold943_2:580048..580869
RNA-Seq ExpressionMS015872
SyntenyMS015872
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603691.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.8e-13486.13Show/hide
Query:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ
        L AGRF+FDANDISS +S C SQRNLRGGIQYHSVAIRTGFI NVY+GSSL+SLYGKC E+N+A +VF+EMPVRN+VSWTAIIAGFAQEWQ+ MCLELFQ
Subjt:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ

Query:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
        +MRRM L+PNEFTFATILSAC GSGALGVGRS HCQT KMG DSHVHIANALISMYCK GALNFA+Y+FEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
Subjt:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF

Query:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        KAM KQQQV+AD ITFLGVLSSCRH GLVEEGR YFNLM+ELG KP+LDHYSCVIDL GRAGLL EAQNFIENM
Subjt:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

KAG7033868.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-13486.13Show/hide
Query:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ
        L AGRF+FDANDISS +S C SQRNLRGGIQYHSVAIRTGFI NVY+GSSL+SLYGKC E+N+A +VF+EMPVRN+VSWTAIIAGFAQEWQ+ MCLELFQ
Subjt:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ

Query:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
        +MRRM L+PNEFTFATILSAC GSGALGVGRS HCQT KMG DSHVHIANALISMYCK GALNFA+Y+FEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
Subjt:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF

Query:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        KAM KQQQV+AD ITFLGVLSSCRH GLVEEGR YFNLM+ELG KP+LDHYSCVIDL GRAGLL EAQNFIENM
Subjt:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

XP_004142220.1 pentatricopeptide repeat-containing protein At2g37320 [Cucumis sativus]3.4e-13384.93Show/hide
Query:  AGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQM
        AGRFKF+ANDISSV+S C+SQRNLRGGIQYHSVAIRTGFI NVY+GSSL+SLYGKCGEL+NAY+VF+EMPVRN+VSWTAIIAGFA EWQ+ MCLELFQ+M
Subjt:  AGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQM

Query:  RRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKA
        +RM L+PNEFTF TIL+AC GSGALGVGRS HCQT+KMG  S++H+ANALISMYCK GALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSL+AIDLFKA
Subjt:  RRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKA

Query:  MGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        M KQ+QV+ADAITFLGVLSSCRHAG VEEGR YFNLM+ELG KP+LDHYSCVIDL GRAGLL EAQNFIE M
Subjt:  MGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

XP_022143730.1 pentatricopeptide repeat-containing protein At2g37320 [Momordica charantia]7.7e-15499.27Show/hide
Query:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ
        LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ
Subjt:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ

Query:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
        QMRRMELRPNEFTFATILSA PGSGALGVGRSFHCQTIKMG DSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
Subjt:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF

Query:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
Subjt:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

XP_022949850.1 pentatricopeptide repeat-containing protein At2g37320 [Cucurbita moschata]1.3e-13285.04Show/hide
Query:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ
        L AGRF+FDANDISS +S C SQRN RGGIQYHSVAIRTGFI NVY+GSSL+SLYGKC E+N+A +VF+EMPVRN+VSWTAIIAGFAQEWQ+ MCLELFQ
Subjt:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ

Query:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
        +MRRM L+PNEFTFATILSAC GSGALGVGRS HCQT KMG DSHVHIANALISMYCK GALNFA+Y+FEAMEVKDTVSWNS+IAGYAQHGLSLQAIDLF
Subjt:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF

Query:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        KAM KQQQV+AD ITFLGVLSSCRH GLVEEGR YFNLM+ELG KP+LDHYSCVIDL GRAGLL EAQN IENM
Subjt:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

TrEMBL top hitse value%identityAlignment
A0A0A0KX36 Uncharacterized protein1.6e-13384.93Show/hide
Query:  AGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQM
        AGRFKF+ANDISSV+S C+SQRNLRGGIQYHSVAIRTGFI NVY+GSSL+SLYGKCGEL+NAY+VF+EMPVRN+VSWTAIIAGFA EWQ+ MCLELFQ+M
Subjt:  AGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQM

Query:  RRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKA
        +RM L+PNEFTF TIL+AC GSGALGVGRS HCQT+KMG  S++H+ANALISMYCK GALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSL+AIDLFKA
Subjt:  RRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKA

Query:  MGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        M KQ+QV+ADAITFLGVLSSCRHAG VEEGR YFNLM+ELG KP+LDHYSCVIDL GRAGLL EAQNFIE M
Subjt:  MGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

A0A5A7U1F7 Pentatricopeptide repeat-containing protein2.6e-13183.82Show/hide
Query:  AGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQM
        AGRFKF ANDISSV+S C+SQRNLRGG+QYHSVAIRTGFI NVY+GSSL+SLYGKCGEL+NAY++F+EMPVRN+VSWTAIIAGFA EWQ+ MCLELF++M
Subjt:  AGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQM

Query:  RRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKA
        +RM L+PNEFTF TIL+AC GSGALGVGRS HCQT KMG  S++HIANALISMYCK GALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLS +AIDLFKA
Subjt:  RRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKA

Query:  MGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        M KQ+QV+ADAITFLGVLSSCRHAG VEEGR YFNLM+ELG KP+LDHYSCVIDL GRAGLL EAQNFIE M
Subjt:  MGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

A0A6J1CPL2 pentatricopeptide repeat-containing protein At2g373203.7e-15499.27Show/hide
Query:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ
        LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ
Subjt:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ

Query:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
        QMRRMELRPNEFTFATILSA PGSGALGVGRSFHCQTIKMG DSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
Subjt:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF

Query:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
Subjt:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

A0A6J1GDY6 pentatricopeptide repeat-containing protein At2g373206.2e-13385.04Show/hide
Query:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ
        L AGRF+FDANDISS +S C SQRN RGGIQYHSVAIRTGFI NVY+GSSL+SLYGKC E+N+A +VF+EMPVRN+VSWTAIIAGFAQEWQ+ MCLELFQ
Subjt:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ

Query:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
        +MRRM L+PNEFTFATILSAC GSGALGVGRS HCQT KMG DSHVHIANALISMYCK GALNFA+Y+FEAMEVKDTVSWNS+IAGYAQHGLSLQAIDLF
Subjt:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF

Query:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        KAM KQQQV+AD ITFLGVLSSCRH GLVEEGR YFNLM+ELG KP+LDHYSCVIDL GRAGLL EAQN IENM
Subjt:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

A0A6J1IKW6 pentatricopeptide repeat-containing protein At2g373201.2e-13184.31Show/hide
Query:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ
        L AGRF+FDANDISS +S C SQRNLRGGIQYHSVAIRTGFI NVY+GSSL+SLYGKC E+ +A +VF+EMPVRN+VSWTAIIAGFAQEWQ+ MCLELFQ
Subjt:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ

Query:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
        +MRRM L+PNEFTFATILSAC GSGALGVGRS HCQT KMG DSHVHIANALISMYCK GALNFA+Y+FEAMEVKDTVSWNSMIAGYAQHGLSL+AIDLF
Subjt:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF

Query:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        +AM KQQQV+AD ITFLGVLSSCRH GLVEEGR YFNLM+EL  KP+LDHYSCVIDL GRAGLL EAQNFIE M
Subjt:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

SwissProt top hitse value%identityAlignment
Q9CAA8 Putative pentatricopeptide repeat-containing protein At1g689305.0e-5539.78Show/hide
Query:  KFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRME
        K D     SV+ +C     +  G Q H+  IRT F  ++Y+GS+LI +Y KC  L+ A  VF+ M  +N+VSWTA++ G+ Q  +    +++F  M+R  
Subjt:  KFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRME

Query:  LRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQ
        + P+ +T    +SAC    +L  G  FH + I  GL  +V ++N+L+++Y K G ++ +  +F  M V+D VSW +M++ YAQ G +++ I LF  M  Q
Subjt:  LRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQ

Query:  QQVKADAITFLGVLSSCRHAGLVEEGRCYFNLML-ELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
          +K D +T  GV+S+C  AGLVE+G+ YF LM  E G  P + HYSC+IDLF R+G L EA  FI  M
Subjt:  QQVKADAITFLGVLSSCRHAGLVEEGRCYFNLML-ELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

Q9LTF4 Putative pentatricopeptide repeat-containing protein At5g526309.4e-5438.69Show/hide
Query:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ
        + AG  + D + + S   SC+       G   H ++++TG+  +V++GSSL+ +Y KCGE+  A K+F+EMP RN+V+W+ ++ G+AQ  +    L LF+
Subjt:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ

Query:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
        +     L  N+++F++++S C  S  L +GR  H  +IK   DS   + ++L+S+Y K G    A  +F  + VK+   WN+M+  YAQH  + + I+LF
Subjt:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF

Query:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        K M K   +K + ITFL VL++C HAGLV+EGR YF+ M E   +P   HY+ ++D+ GRAG L EA   I NM
Subjt:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

Q9SX45 Pentatricopeptide repeat-containing protein At1g502701.0e-5540.91Show/hide
Query:  ISSVVSSCSSQRNLRGGIQYHSVAIRTGFIP-NVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNE
        + SV+ +     ++R G   H + + TG +  +V+IGSSL+ +YGKC   ++A KVF+EMP RN+V+WTA+IAG+ Q       + +F++M + ++ PNE
Subjt:  ISSVVSSCSSQRNLRGGIQYHSVAIRTGFIP-NVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNE

Query:  FTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQQQVKA
         T +++LSAC   GAL  GR  HC  IK  ++ +      LI +Y K G L  A+ +FE +  K+  +W +MI G+A HG +  A DLF  M     V  
Subjt:  FTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQQQVKA

Query:  DAITFLGVLSSCRHAGLVEEG-RCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        + +TF+ VLS+C H GLVEEG R + ++      +P  DHY+C++DLFGR GLL EA+  IE M
Subjt:  DAITFLGVLSSCRHAGLVEEG-RCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

Q9ZUT4 Pentatricopeptide repeat-containing protein At2g373201.7e-9561.34Show/hide
Query:  FKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRM
        + FDA  +SS V SC   R+ R G  +H +A++ GFI +VY+GSSL+ LY   GE+ NAYKVFEEMP RN+VSWTA+I+GFAQEW++ +CL+L+ +MR+ 
Subjt:  FKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRM

Query:  ELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGK
           PN++TF  +LSAC GSGALG GRS HCQT+ MGL S++HI+N+LISMYCK G L  A  IF+    KD VSWNSMIAGYAQHGL++QAI+LF+ M  
Subjt:  ELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGK

Query:  QQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        +   K DAIT+LGVLSSCRHAGLV+EGR +FNLM E G KP+L+HYSC++DL GR GLL EA   IENM
Subjt:  QQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

Q9ZUW3 Pentatricopeptide repeat-containing protein At2g276102.9e-5541.46Show/hide
Query:  QYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSACPGSGA-LGV
        + H+  ++T +  +  +G++L+  Y K G++  A KVF  +  ++IV+W+A++AG+AQ  +    +++F ++ +  ++PNEFTF++IL+ C  + A +G 
Subjt:  QYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSACPGSGA-LGV

Query:  GRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQQQVKADAITFLGVLSSCRHAGLV
        G+ FH   IK  LDS + +++AL++MY K G +  A  +F+    KD VSWNSMI+GYAQHG +++A+D+FK M K+++VK D +TF+GV ++C HAGLV
Subjt:  GRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQQQVKADAITFLGVLSSCRHAGLV

Query:  EEGRCYFNLML-ELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        EEG  YF++M+ +    P  +H SC++DL+ RAG L +A   IENM
Subjt:  EEGRCYFNLML-ELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

Arabidopsis top hitse value%identityAlignment
AT1G50270.1 Pentatricopeptide repeat (PPR) superfamily protein7.2e-5740.91Show/hide
Query:  ISSVVSSCSSQRNLRGGIQYHSVAIRTGFIP-NVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNE
        + SV+ +     ++R G   H + + TG +  +V+IGSSL+ +YGKC   ++A KVF+EMP RN+V+WTA+IAG+ Q       + +F++M + ++ PNE
Subjt:  ISSVVSSCSSQRNLRGGIQYHSVAIRTGFIP-NVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNE

Query:  FTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQQQVKA
         T +++LSAC   GAL  GR  HC  IK  ++ +      LI +Y K G L  A+ +FE +  K+  +W +MI G+A HG +  A DLF  M     V  
Subjt:  FTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQQQVKA

Query:  DAITFLGVLSSCRHAGLVEEG-RCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        + +TF+ VLS+C H GLVEEG R + ++      +P  DHY+C++DLFGR GLL EA+  IE M
Subjt:  DAITFLGVLSSCRHAGLVEEG-RCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

AT1G68930.1 pentatricopeptide (PPR) repeat-containing protein3.6e-5639.78Show/hide
Query:  KFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRME
        K D     SV+ +C     +  G Q H+  IRT F  ++Y+GS+LI +Y KC  L+ A  VF+ M  +N+VSWTA++ G+ Q  +    +++F  M+R  
Subjt:  KFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRME

Query:  LRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQ
        + P+ +T    +SAC    +L  G  FH + I  GL  +V ++N+L+++Y K G ++ +  +F  M V+D VSW +M++ YAQ G +++ I LF  M  Q
Subjt:  LRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQ

Query:  QQVKADAITFLGVLSSCRHAGLVEEGRCYFNLML-ELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
          +K D +T  GV+S+C  AGLVE+G+ YF LM  E G  P + HYSC+IDLF R+G L EA  FI  M
Subjt:  QQVKADAITFLGVLSSCRHAGLVEEGRCYFNLML-ELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.1e-5641.46Show/hide
Query:  QYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSACPGSGA-LGV
        + H+  ++T +  +  +G++L+  Y K G++  A KVF  +  ++IV+W+A++AG+AQ  +    +++F ++ +  ++PNEFTF++IL+ C  + A +G 
Subjt:  QYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPNEFTFATILSACPGSGA-LGV

Query:  GRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQQQVKADAITFLGVLSSCRHAGLV
        G+ FH   IK  LDS + +++AL++MY K G +  A  +F+    KD VSWNSMI+GYAQHG +++A+D+FK M K+++VK D +TF+GV ++C HAGLV
Subjt:  GRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQQQVKADAITFLGVLSSCRHAGLV

Query:  EEGRCYFNLML-ELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        EEG  YF++M+ +    P  +H SC++DL+ RAG L +A   IENM
Subjt:  EEGRCYFNLML-ELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

AT2G37320.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-9661.34Show/hide
Query:  FKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRM
        + FDA  +SS V SC   R+ R G  +H +A++ GFI +VY+GSSL+ LY   GE+ NAYKVFEEMP RN+VSWTA+I+GFAQEW++ +CL+L+ +MR+ 
Subjt:  FKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRM

Query:  ELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGK
           PN++TF  +LSAC GSGALG GRS HCQT+ MGL S++HI+N+LISMYCK G L  A  IF+    KD VSWNSMIAGYAQHGL++QAI+LF+ M  
Subjt:  ELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGK

Query:  QQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        +   K DAIT+LGVLSSCRHAGLV+EGR +FNLM E G KP+L+HYSC++DL GR GLL EA   IENM
Subjt:  QQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM

AT5G52630.1 mitochondrial RNAediting factor 16.7e-5538.69Show/hide
Query:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ
        + AG  + D + + S   SC+       G   H ++++TG+  +V++GSSL+ +Y KCGE+  A K+F+EMP RN+V+W+ ++ G+AQ  +    L LF+
Subjt:  LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQ

Query:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF
        +     L  N+++F++++S C  S  L +GR  H  +IK   DS   + ++L+S+Y K G    A  +F  + VK+   WN+M+  YAQH  + + I+LF
Subjt:  QMRRMELRPNEFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLF

Query:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM
        K M K   +K + ITFL VL++C HAGLV+EGR YF+ M E   +P   HY+ ++D+ GRAG L EA   I NM
Subjt:  KAMGKQQQVKADAITFLGVLSSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGCGCGCTGGAAGATTTAAATTCGATGCGAACGATATATCCAGCGTTGTGAGTTCGTGCAGTTCTCAGCGTAATCTCCGCGGTGGAATTCAATACCATTCTGTGGCGAT
ACGGACTGGGTTTATCCCCAATGTGTATATAGGAAGTTCACTGATAAGTTTGTATGGGAAGTGCGGGGAGTTGAATAACGCATATAAGGTGTTTGAAGAAATGCCTGTGA
GAAATATTGTGTCATGGACAGCCATTATTGCTGGGTTTGCTCAAGAATGGCAGATTGGTATGTGCTTGGAGCTCTTCCAACAGATGAGAAGAATGGAATTGCGACCCAAT
GAGTTTACTTTTGCCACCATATTGAGCGCTTGCCCTGGCAGTGGAGCTCTTGGAGTAGGGAGAAGTTTTCATTGCCAAACAATCAAAATGGGCTTGGATTCTCATGTCCA
TATTGCAAATGCTCTGATCTCAATGTATTGTAAATCTGGAGCTCTTAACTTTGCATTATACATATTTGAAGCCATGGAAGTGAAAGACACTGTTTCCTGGAACTCCATGA
TTGCAGGTTATGCCCAGCATGGACTCTCTCTGCAAGCCATTGATCTTTTCAAAGCAATGGGGAAGCAGCAGCAAGTCAAAGCCGATGCGATCACTTTCCTCGGTGTCCTG
TCCTCTTGTAGGCATGCTGGGCTTGTGGAAGAGGGCAGATGTTACTTCAATCTAATGCTCGAGCTCGGTTTTAAACCAGACTTGGATCATTATTCGTGTGTTATTGATCT
GTTTGGTCGAGCGGGGCTGCTGACAGAGGCTCAGAACTTCATTGAGAACATG
mRNA sequenceShow/hide mRNA sequence
TTGCGCGCTGGAAGATTTAAATTCGATGCGAACGATATATCCAGCGTTGTGAGTTCGTGCAGTTCTCAGCGTAATCTCCGCGGTGGAATTCAATACCATTCTGTGGCGAT
ACGGACTGGGTTTATCCCCAATGTGTATATAGGAAGTTCACTGATAAGTTTGTATGGGAAGTGCGGGGAGTTGAATAACGCATATAAGGTGTTTGAAGAAATGCCTGTGA
GAAATATTGTGTCATGGACAGCCATTATTGCTGGGTTTGCTCAAGAATGGCAGATTGGTATGTGCTTGGAGCTCTTCCAACAGATGAGAAGAATGGAATTGCGACCCAAT
GAGTTTACTTTTGCCACCATATTGAGCGCTTGCCCTGGCAGTGGAGCTCTTGGAGTAGGGAGAAGTTTTCATTGCCAAACAATCAAAATGGGCTTGGATTCTCATGTCCA
TATTGCAAATGCTCTGATCTCAATGTATTGTAAATCTGGAGCTCTTAACTTTGCATTATACATATTTGAAGCCATGGAAGTGAAAGACACTGTTTCCTGGAACTCCATGA
TTGCAGGTTATGCCCAGCATGGACTCTCTCTGCAAGCCATTGATCTTTTCAAAGCAATGGGGAAGCAGCAGCAAGTCAAAGCCGATGCGATCACTTTCCTCGGTGTCCTG
TCCTCTTGTAGGCATGCTGGGCTTGTGGAAGAGGGCAGATGTTACTTCAATCTAATGCTCGAGCTCGGTTTTAAACCAGACTTGGATCATTATTCGTGTGTTATTGATCT
GTTTGGTCGAGCGGGGCTGCTGACAGAGGCTCAGAACTTCATTGAGAACATG
Protein sequenceShow/hide protein sequence
LRAGRFKFDANDISSVVSSCSSQRNLRGGIQYHSVAIRTGFIPNVYIGSSLISLYGKCGELNNAYKVFEEMPVRNIVSWTAIIAGFAQEWQIGMCLELFQQMRRMELRPN
EFTFATILSACPGSGALGVGRSFHCQTIKMGLDSHVHIANALISMYCKSGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLQAIDLFKAMGKQQQVKADAITFLGVL
SSCRHAGLVEEGRCYFNLMLELGFKPDLDHYSCVIDLFGRAGLLTEAQNFIENM