; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015888 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015888
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SLOW GREEN 1, chloroplastic-like
Genome locationscaffold943_2:678031..679083
RNA-Seq ExpressionMS015888
SyntenyMS015888
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143951.1 protein SLOW GREEN 1, chloroplastic-like [Momordica charantia]1.3e-18598.85Show/hide
Query:  MESLHHRLHPSPFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFFLRF
        MESLHHRLH SPFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTP NAKSSVSETWNAGFLRTACISIAAAAFFFLRF
Subjt:  MESLHHRLHPSPFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFFLRF

Query:  DHRHAVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAKNEFE
        DHRHAVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIEL+PNDRELPVLRANLHSCMGELELAKNEFE
Subjt:  DHRHAVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAKNEFE

Query:  EILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLR
        EILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEA+EKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLR
Subjt:  EILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLR

Query:  KNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLEEGAGLKS
        KNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLEEGAGLKS
Subjt:  KNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLEEGAGLKS

XP_022962798.1 protein SLOW GREEN 1, chloroplastic-like [Cucurbita moschata]1.5e-14179.49Show/hide
Query:  MESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAAF
        + + HHR  PS   LSFS RLPSFS P SSL F +PPPS LRSP SFRSLSV AS SPSTSD   +T  NAK S+SET N    +GFLRTACIS+AAAAF
Subjt:  MESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAAF

Query:  FFLRFDHRHA--VAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELE
        FFLRFDHR A  VA PVAPE TES EES  YEENESVVEEQP D+SNDVEALRSLVE NVKSGKLPEA++ALNRLIE++PN+ ELP+LRAN HS MGELE
Subjt:  FFLRFDHRHA--VAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELE

Query:  LAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQG
        LAK+EFEEIL EDPLRVEAYHGLA+VSEQLNDNSLK V+KRIE+AMEKCKKQ+ KSDIRDFKLL+AQIKVMEGSY+DALKAYQELVREEPRDFRPYLCQG
Subjt:  LAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQG

Query:  IIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS
        IIY+LLRKN+EAEKQF+KFRRLVPKNHPY+EYFD+N+FATK+F QKLE EGAGLKS
Subjt:  IIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS

XP_022972742.1 protein SLOW GREEN 1, chloroplastic-like [Cucurbita maxima]1.9e-14179.49Show/hide
Query:  MESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAAF
        + + HHR  PS   LSFS RLP FS P SSL FR+PP S LRSP SFRSLSV AS SPSTSD   +T  NAK S+SET N    +GFLRTACIS+AAAAF
Subjt:  MESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAAF

Query:  FFLRFDHRHA--VAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELE
        FFLRFDHR A  VA PVAPE T+S EES  YEENESVVEEQP D+SNDVEALRSLVE NVKSGKLPEA++ALNRLIE++PN+ ELP+LRAN HS MGELE
Subjt:  FFLRFDHRHA--VAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELE

Query:  LAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQG
        LAK+EFEEIL EDPLRVEAYHGLAMVSEQLNDNSLK+V+KRIE+AMEKCKKQ+ KSDIRDFKLL+AQIKVMEGSY+DALKAYQELVREEPRDFRPYLCQG
Subjt:  LAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQG

Query:  IIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS
        IIY+LLRKNDEAEKQF+KFRRLVPKNHPY+EYFD+N+FATK+F QKLE EGAGLKS
Subjt:  IIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS

XP_023517061.1 protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo]7.4e-14179.21Show/hide
Query:  MESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAAF
        + + HHR  PS   LSFS RLPSFS P SSL F +PPP  LRSP SFRSLSV AS SPSTSD   +T  NAK S+SET N    +GFLRTACIS+AAAAF
Subjt:  MESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAAF

Query:  FFLRFDHRHA--VAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELE
        FFLRFDHR A  VA PVAPE TES EES  YEENE+VVEEQP D+SNDVEALRSLVE NVKSGKLPEA++ALNRLIE++PN+ ELP+LRAN HS MGELE
Subjt:  FFLRFDHRHA--VAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELE

Query:  LAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQG
        LAK+EFEEIL EDPLRVEAYHGLAMVSEQLNDNSLK V+KRIE+AMEKCKKQ+ KSDIRDFKLL+AQIKVMEGSY+DALKAYQELVREEPRDFRPYLCQG
Subjt:  LAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQG

Query:  IIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS
        IIY+LLRKN+EAEKQF+KFRRLVPKNHPY+EYFD+N+FATK+F QKLE EGAGLKS
Subjt:  IIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS

XP_038883735.1 protein SLOW GREEN 1, chloroplastic-like [Benincasa hispida]1.6e-14882.91Show/hide
Query:  TMESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAA
        ++ +LHHR HPS   LS SHRLPSFS PISSLSFR+PPPSPLR  SSFRSLSV AS S STSD   +T  N KSS+SET N    +GFL+TACIS+AAAA
Subjt:  TMESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAA

Query:  FFFLRFDHRH--AVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGEL
        FFFLRFDHR   AVAVPVAPETTEST+ES AYEENESVVEE+P DD NDVEALRSLVE  VKSGKLPEAV+ALNRLIEL+PND ELP+LRAN HS MGEL
Subjt:  FFFLRFDHRH--AVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGEL

Query:  ELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQ
        ELAKNEFEEILAEDP RVEAYHGLAMV+EQLNDNSLK+V+KRIEEAMEKCKKQ+ KSDIRDFKLLVAQIKVMEGSY+DALKAYQELVREEPRDFRPYLCQ
Subjt:  ELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQ

Query:  GIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS
        GIIYTLLRKN+EAEKQF+KFRRLVPKNHPYKEYFD+NMFATK+F+QKLE EGAGLKS
Subjt:  GIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS

TrEMBL top hitse value%identityAlignment
A0A6J1CRU6 protein SLOW GREEN 1, chloroplastic-like6.2e-18698.85Show/hide
Query:  MESLHHRLHPSPFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFFLRF
        MESLHHRLH SPFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTP NAKSSVSETWNAGFLRTACISIAAAAFFFLRF
Subjt:  MESLHHRLHPSPFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFFLRF

Query:  DHRHAVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAKNEFE
        DHRHAVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIEL+PNDRELPVLRANLHSCMGELELAKNEFE
Subjt:  DHRHAVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAKNEFE

Query:  EILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLR
        EILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEA+EKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLR
Subjt:  EILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLR

Query:  KNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLEEGAGLKS
        KNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLEEGAGLKS
Subjt:  KNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLEEGAGLKS

A0A6J1GF65 protein SLOW GREEN 1, chloroplastic-like8.0e-13375.7Show/hide
Query:  TMESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISI-AAA
        ++ ++HHR HPS   LSFSHRLPSF  PISSLSF   PP+ LR  SSFRSLSV AS S STSD   +   NAKSS+SET N    +GFL+TACIS+ AAA
Subjt:  TMESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISI-AAA

Query:  AFFFLRFDHRH--AVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGE
        AF+FLRFDHR   AVAVPVA ETTEST+ES A+EENESVVEE+P DDS+  E LRSLVE NVK GKLPEA++ L+RLIEL+PNDRELP+LRAN+ S  G+
Subjt:  AFFFLRFDHRH--AVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGE

Query:  LELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLC
        LELA+NEFEEIL EDP RVEAYHGL MVSEQLNDNSLK+V+KRIEEA+EKCKKQ+ KS IRDFKLL+AQIKVM+GSY+DALKAY ELVREEP+DFRPYLC
Subjt:  LELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLC

Query:  QGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS
        QGIIYTLLRKN EAEKQF+KFRRLVPKNHPYKEYFD+NMFATK+F+QKLE E AGLKS
Subjt:  QGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS

A0A6J1HFV1 protein SLOW GREEN 1, chloroplastic-like7.2e-14279.49Show/hide
Query:  MESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAAF
        + + HHR  PS   LSFS RLPSFS P SSL F +PPPS LRSP SFRSLSV AS SPSTSD   +T  NAK S+SET N    +GFLRTACIS+AAAAF
Subjt:  MESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAAF

Query:  FFLRFDHRHA--VAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELE
        FFLRFDHR A  VA PVAPE TES EES  YEENESVVEEQP D+SNDVEALRSLVE NVKSGKLPEA++ALNRLIE++PN+ ELP+LRAN HS MGELE
Subjt:  FFLRFDHRHA--VAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELE

Query:  LAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQG
        LAK+EFEEIL EDPLRVEAYHGLA+VSEQLNDNSLK V+KRIE+AMEKCKKQ+ KSDIRDFKLL+AQIKVMEGSY+DALKAYQELVREEPRDFRPYLCQG
Subjt:  LAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQG

Query:  IIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS
        IIY+LLRKN+EAEKQF+KFRRLVPKNHPY+EYFD+N+FATK+F QKLE EGAGLKS
Subjt:  IIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS

A0A6J1I5P2 protein SLOW GREEN 1, chloroplastic-like9.4e-14279.49Show/hide
Query:  MESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAAF
        + + HHR  PS   LSFS RLP FS P SSL FR+PP S LRSP SFRSLSV AS SPSTSD   +T  NAK S+SET N    +GFLRTACIS+AAAAF
Subjt:  MESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISIAAAAF

Query:  FFLRFDHRHA--VAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELE
        FFLRFDHR A  VA PVAPE T+S EES  YEENESVVEEQP D+SNDVEALRSLVE NVKSGKLPEA++ALNRLIE++PN+ ELP+LRAN HS MGELE
Subjt:  FFLRFDHRHA--VAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELE

Query:  LAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQG
        LAK+EFEEIL EDPLRVEAYHGLAMVSEQLNDNSLK+V+KRIE+AMEKCKKQ+ KSDIRDFKLL+AQIKVMEGSY+DALKAYQELVREEPRDFRPYLCQG
Subjt:  LAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQG

Query:  IIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS
        IIY+LLRKNDEAEKQF+KFRRLVPKNHPY+EYFD+N+FATK+F QKLE EGAGLKS
Subjt:  IIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS

A0A6J1IQW2 protein SLOW GREEN 1, chloroplastic-like1.0e-13275.42Show/hide
Query:  TMESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISI-AAA
        ++ ++HHR HPS   LSFSHRLPSF  PISSLSF   PP+ LR  SSFRSLSV AS S STSD   +   NAKSS+SET N    +GFL+TACIS+ AAA
Subjt:  TMESLHHRLHPS-PFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWN----AGFLRTACISI-AAA

Query:  AFFFLRFDHRH--AVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGE
        AF+FLRFDHR   AVAVPVAP TTEST+ES  +EENESVVEE+P DD    E LRSLVE NVKSGKLPEA++ L+RLIE++PNDRELP+LRAN+ S  G+
Subjt:  AFFFLRFDHRH--AVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGE

Query:  LELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLC
        LELAKNEFEEIL EDP RVEAYHGL MVSEQLNDNSLK+V+KRIEEAMEKCKKQ+ KS IRDFKLL+AQIKVM+GSY+DALKAY ELVREEP+DFRPYLC
Subjt:  LELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLC

Query:  QGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS
        +GIIYTLLRKN EAEKQF+KFRRLVPKNHPYKEYFD+NMFATK+F+QKLE E AGLKS
Subjt:  QGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE-EGAGLKS

SwissProt top hitse value%identityAlignment
Q9LS48 protein SLOW GREEN 1, chloroplastic1.6e-2633.23Show/hide
Query:  TPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFFLRFDHRHAVAVPVAPETTESTEESIAYEE--NESVV
        TP   PL       S+ + AS + ++S   +  P   KS         F ++A I I AA     +F       +PV  E+  +T E   YEE   E + 
Subjt:  TPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFFLRFDHRHAVAVPVAPETTESTEESIAYEE--NESVV

Query:  EEQPKDDSND-----VEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDN
        E  P  +  D     VE LRSL++  ++ G+  EA+  L RL+  +P + E   L A L   MG  E A+  FEEIL  +PL  EA    A++ ++  + 
Subjt:  EEQPKDDSND-----VEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDN

Query:  SLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYF
        +   V +R+E+A+   + +    + RD +L++AQI  ++ +  +ALK+Y++L +E+P+DFRPY C+G+IY+LL KN EA++QF K+R L PK    + Y 
Subjt:  SLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYF

Query:  DQNMFATKVF
           +   K+F
Subjt:  DQNMFATKVF

Arabidopsis top hitse value%identityAlignment
AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-7950.57Show/hide
Query:  MESLHH-RLHPSP-FLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFF-
        MESL   +LH  P  LSF+H   SF    SS S R+ P    RS SSF+ +S+ AS                 SS S+      L++ C+S  AAA  F 
Subjt:  MESLHH-RLHPSP-FLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFF-

Query:  --LRFDHRHAVAVPVAP----ETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGE
          L+     A+A PVA     E+ + +  ++++EE E  +EE      +DVEALRSL+E  +KS KL EA++ ++RLIEL+P ++E P+L+AN+ S  G+
Subjt:  --LRFDHRHAVAVPVAP----ETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGE

Query:  LELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLC
        LE AK  FEEIL +DPLRVEAYHGL M      D+ L  V KRIEEAM +CKK+ ++ D+RDFKLLVAQI+V+EG + +ALK Y+ELV+EEPRDFRPYLC
Subjt:  LELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLC

Query:  QGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE
        QGIIYT+L+K +EAEKQF+KFRRLVPKNHPY+EYF  NM A+K+F++K++
Subjt:  QGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE

AT3G09490.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.8e-4038.01Show/hide
Query:  PSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFF---LRFDHRHAVAVPVAPETTESTEESIAYEENESVVEE
        PS L  P  FR        + ST   F     ++ SS S       L+T  IS+ AAA  F     F ++ A   PVA                E+ +E+
Subjt:  PSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFF---LRFDHRHAVAVPVAPETTESTEESIAYEENESVVEE

Query:  QPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDN-SLKEVS
          +  SNDV AL  L E   KS K  +A+  L+RLIE++P +R+ P ++A + S  G+ E A   FEEIL +DP+RV+AYH L M  E  N    L E+ 
Subjt:  QPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDN-SLKEVS

Query:  KRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKE
        KRI + + +CKK+    +I  F++L+AQI+ +EG   +A++  +ELV+E+P DF  YL QG++YTL+ K +EA KQF+   R++P+NHP +E
Subjt:  KRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKE

AT3G53560.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.8e-7650.14Show/hide
Query:  MESLHH-RLHPSPF-LSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFFL
        MESL   +LH  PF LSF+H   + S+      F+    S ++  SS +S S+ AS S   +     TPL   +           ++ CI++  AA   L
Subjt:  MESLHH-RLHPSPF-LSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFFL

Query:  RFDH--RHAVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAK
           H    A+A P+AP  +  ++E++  EE E  ++E      +DV+ALRSL+E  +KS KL EAV+ ++RLI+L+P ++E PVL+AN+ +  G+L+LAK
Subjt:  RFDH--RHAVAVPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAK

Query:  NEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIY
          FEEILA+DPLRVEAYHGL M         LKEV  RIEEAM KCKK+++++D RDFKLLVAQI+V+EG + +ALK YQELV+EEPRDFRPYLCQGIIY
Subjt:  NEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIY

Query:  TLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE
        TLL+K D+AE+QFD FR+LVPKNHPY+EYF  NM ATK+FS+K +
Subjt:  TLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFATKVFSQKLE

AT4G39470.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-3433.12Show/hide
Query:  PSPLRSPSSFR-SLSVTASFSP--STSDAFHQTPLNAKSSVSETWNAGFL----RTACISIAAAAFFFLRF-DHRHAVAVPVAPETTESTEESIAYEENE
        P+ LR+P+ F+     +  F+P  +  D F       +SS S   +  F+    R A I +   +F FL F   + A+A+P A      T  S A  E+E
Subjt:  PSPLRSPSSFR-SLSVTASFSP--STSDAFHQTPLNAKSSVSETWNAGFL----RTACISIAAAAFFFLRF-DHRHAVAVPVAPETTESTEESIAYEENE

Query:  SVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSL
         + E+  +++  ++EA++++V   ++ GK  +AV  + +L++L+P++ E  +L A  +  MGEL  AK  +++IL E PL + A HGLAMV  + +D S+
Subjt:  SVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSL

Query:  KEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQ
         ++   + EAME  ++ +  ++ R+ ++L+ Q+ ++EG + + LK +Q++V + PRDFRPYLCQGI+Y+L+ K +EA +QF+ +  LVP   P K + D 
Subjt:  KEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQ

Query:  NMFATKVFSQK
           A +  S++
Subjt:  NMFATKVFSQK

AT5G02590.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.7e-5841.03Show/hide
Query:  ESLHHRLHPSPFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFFLRFD
        ++LH RL        +HR P    P+S      PPPS +   SSF S                    N K S        FL+T C+++  AA       
Subjt:  ESLHHRLHPSPFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFFLRFD

Query:  HRHA--------VAVPVAPET-TESTEESIA----YEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSC
        H           V+ P  P T  + T + I+     EE E+ +E+    + NDVEAL+SL++   ++  +  A++ LNRLIE++P ++E  +L+A + + 
Subjt:  HRHA--------VAVPVAPET-TESTEESIA----YEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSC

Query:  MGELELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRP
         G+ + A   FEE+L++DP RVEAYHGL M   + +++ L E+  RI EA+EKCKK ++K D RDF LL+AQI+V++G+  +AL+ YQELV++EP+DFRP
Subjt:  MGELELAKNEFEEILAEDPLRVEAYHGLAMVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRP

Query:  YLCQGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFAT-KVFSQ
        YLCQG+IYTL++K DEAEKQF +FRRLVP+NHPYKEY D N+  T K+F++
Subjt:  YLCQGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFDQNMFAT-KVFSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCTCGACGATGGAGTCGCTTCACCACCGCCTTCATCCTTCTCCATTTCTTTCCTTCAGCCACCGCCTTCCGTCGTTCTCCAACCCCATTTCTTCCCTCTCCTTCCGTAC
TCCGCCGCCGTCTCCGCTCCGTTCTCCCTCGTCTTTCAGGTCGTTGTCTGTTACAGCCTCATTCTCCCCGTCGACCTCCGACGCGTTTCACCAAACCCCTCTGAACGCTA
AATCTTCAGTTTCCGAGACCTGGAATGCCGGTTTTCTGAGAACCGCTTGCATCTCCATTGCCGCTGCTGCATTCTTCTTCCTCCGGTTCGACCATCGGCACGCAGTTGCT
GTCCCAGTGGCTCCGGAGACGACGGAGTCTACCGAGGAATCAATTGCATATGAAGAAAATGAGAGCGTTGTGGAAGAGCAACCCAAGGATGATTCCAATGATGTTGAAGC
CCTTCGATCCCTCGTTGAGGCGAATGTGAAGTCCGGTAAACTCCCCGAAGCAGTTGATGCCCTAAATCGTCTGATCGAACTTAAGCCCAATGACCGTGAGTTGCCGGTGC
TGAGAGCCAATTTACATAGCTGCATGGGGGAGCTTGAATTGGCGAAAAATGAATTCGAGGAGATTTTAGCGGAAGACCCATTGCGTGTTGAGGCCTACCATGGGCTTGCA
ATGGTGTCGGAGCAATTGAACGACAATTCATTGAAGGAAGTTTCCAAAAGAATCGAAGAGGCAATGGAGAAATGCAAGAAGCAGGACAGCAAGTCAGATATCAGGGATTT
CAAGCTTTTGGTTGCGCAAATTAAGGTAATGGAGGGAAGTTATTATGATGCATTGAAAGCTTATCAAGAACTTGTGAGGGAGGAGCCGAGGGATTTTAGGCCATATCTGT
GTCAGGGAATTATATATACTCTGCTACGGAAGAATGATGAGGCTGAGAAACAATTTGATAAATTTAGGAGACTTGTTCCAAAGAACCACCCTTACAAGGAGTACTTTGAT
CAAAACATGTTTGCAACAAAGGTTTTTTCTCAGAAATTAGAGGAGGGAGCTGGCTTGAAGAGC
mRNA sequenceShow/hide mRNA sequence
TTCTCGACGATGGAGTCGCTTCACCACCGCCTTCATCCTTCTCCATTTCTTTCCTTCAGCCACCGCCTTCCGTCGTTCTCCAACCCCATTTCTTCCCTCTCCTTCCGTAC
TCCGCCGCCGTCTCCGCTCCGTTCTCCCTCGTCTTTCAGGTCGTTGTCTGTTACAGCCTCATTCTCCCCGTCGACCTCCGACGCGTTTCACCAAACCCCTCTGAACGCTA
AATCTTCAGTTTCCGAGACCTGGAATGCCGGTTTTCTGAGAACCGCTTGCATCTCCATTGCCGCTGCTGCATTCTTCTTCCTCCGGTTCGACCATCGGCACGCAGTTGCT
GTCCCAGTGGCTCCGGAGACGACGGAGTCTACCGAGGAATCAATTGCATATGAAGAAAATGAGAGCGTTGTGGAAGAGCAACCCAAGGATGATTCCAATGATGTTGAAGC
CCTTCGATCCCTCGTTGAGGCGAATGTGAAGTCCGGTAAACTCCCCGAAGCAGTTGATGCCCTAAATCGTCTGATCGAACTTAAGCCCAATGACCGTGAGTTGCCGGTGC
TGAGAGCCAATTTACATAGCTGCATGGGGGAGCTTGAATTGGCGAAAAATGAATTCGAGGAGATTTTAGCGGAAGACCCATTGCGTGTTGAGGCCTACCATGGGCTTGCA
ATGGTGTCGGAGCAATTGAACGACAATTCATTGAAGGAAGTTTCCAAAAGAATCGAAGAGGCAATGGAGAAATGCAAGAAGCAGGACAGCAAGTCAGATATCAGGGATTT
CAAGCTTTTGGTTGCGCAAATTAAGGTAATGGAGGGAAGTTATTATGATGCATTGAAAGCTTATCAAGAACTTGTGAGGGAGGAGCCGAGGGATTTTAGGCCATATCTGT
GTCAGGGAATTATATATACTCTGCTACGGAAGAATGATGAGGCTGAGAAACAATTTGATAAATTTAGGAGACTTGTTCCAAAGAACCACCCTTACAAGGAGTACTTTGAT
CAAAACATGTTTGCAACAAAGGTTTTTTCTCAGAAATTAGAGGAGGGAGCTGGCTTGAAGAGC
Protein sequenceShow/hide protein sequence
FSTMESLHHRLHPSPFLSFSHRLPSFSNPISSLSFRTPPPSPLRSPSSFRSLSVTASFSPSTSDAFHQTPLNAKSSVSETWNAGFLRTACISIAAAAFFFLRFDHRHAVA
VPVAPETTESTEESIAYEENESVVEEQPKDDSNDVEALRSLVEANVKSGKLPEAVDALNRLIELKPNDRELPVLRANLHSCMGELELAKNEFEEILAEDPLRVEAYHGLA
MVSEQLNDNSLKEVSKRIEEAMEKCKKQDSKSDIRDFKLLVAQIKVMEGSYYDALKAYQELVREEPRDFRPYLCQGIIYTLLRKNDEAEKQFDKFRRLVPKNHPYKEYFD
QNMFATKVFSQKLEEGAGLKS