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MS015893 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015893
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger protein
Genome locationscaffold943_2:711242..711535
RNA-Seq ExpressionMS015893
SyntenyMS015893
Gene Ontology termsGO:0010200 - response to chitin (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142087.1 zinc finger protein ZAT11 [Cucumis sativus]8.1e-2979.27Show/hide
Query:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV
        K Q QN AVFECKTCNRQFPSFQALGGHRASHKRPRT+ EEPKD A++     KQK+HEC  CG EFSSGQALGGHMRRHRV
Subjt:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV

XP_022962800.1 zinc finger protein ZAT11-like [Cucurbita moschata]2.5e-3071.72Show/hide
Query:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV-TVSGGGFSPMTAAEKI
        KI GQN AVF+CKTCNR F SFQALGGHRASHKRPRTAA+EPKD AE       +KMHEC  CG  FS+GQALGGHMRRHR+ T +GGGFS + A EKI
Subjt:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV-TVSGGGFSPMTAAEKI

XP_022972734.1 zinc finger protein ZAT11-like [Cucurbita maxima]4.7e-2970.59Show/hide
Query:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV-TVSGGGFSP---MTAAE
        KI GQN AVF+CKTCNR F SFQALGGHRASHKRPRTAAEEPKD AE       +KMHEC  CG  FS+GQALGGHMRRHR+ T +GGGFS    + A E
Subjt:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV-TVSGGGFSP---MTAAE

Query:  KI
        KI
Subjt:  KI

XP_023517898.1 zinc finger protein ZAT11-like [Cucurbita pepo subsp. pepo]2.5e-3071.72Show/hide
Query:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV-TVSGGGFSPMTAAEKI
        KI GQN AVF+CKTCNR F SFQALGGHRASHKRPRTAA+EPKD AE       +KMHEC  CG  FS+GQALGGHMRRHR+ T +GGGFS + A EKI
Subjt:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV-TVSGGGFSPMTAAEKI

XP_038883310.1 zinc finger protein ZAT11 [Benincasa hispida]2.3e-3185.54Show/hide
Query:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRVT
        KIQ QN AVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKD AE+     KQKMHEC  CG EFSSGQALGGHMRRHRVT
Subjt:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRVT

TrEMBL top hitse value%identityAlignment
A0A0A0KXE6 Uncharacterized protein3.9e-2979.27Show/hide
Query:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV
        K Q QN AVFECKTCNRQFPSFQALGGHRASHKRPRT+ EEPKD A++     KQK+HEC  CG EFSSGQALGGHMRRHRV
Subjt:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV

A0A1S3BH21 zinc finger protein ZAT111.1e-2878.05Show/hide
Query:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV
        K Q QN A+FECKTCNRQFPSFQALGGHRASHKRPRT+ EEPKD A++     KQK+HEC  CG EFSSGQALGGHMRRHRV
Subjt:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV

A0A5A7TWK4 Zinc finger protein ZAT111.1e-2878.05Show/hide
Query:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV
        K Q QN A+FECKTCNRQFPSFQALGGHRASHKRPRT+ EEPKD A++     KQK+HEC  CG EFSSGQALGGHMRRHRV
Subjt:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV

A0A6J1HG38 zinc finger protein ZAT11-like1.2e-3071.72Show/hide
Query:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV-TVSGGGFSPMTAAEKI
        KI GQN AVF+CKTCNR F SFQALGGHRASHKRPRTAA+EPKD AE       +KMHEC  CG  FS+GQALGGHMRRHR+ T +GGGFS + A EKI
Subjt:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV-TVSGGGFSPMTAAEKI

A0A6J1ICF2 zinc finger protein ZAT11-like2.3e-2970.59Show/hide
Query:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV-TVSGGGFSP---MTAAE
        KI GQN AVF+CKTCNR F SFQALGGHRASHKRPRTAAEEPKD AE       +KMHEC  CG  FS+GQALGGHMRRHR+ T +GGGFS    + A E
Subjt:  KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRV-TVSGGGFSP---MTAAE

Query:  KI
        KI
Subjt:  KI

SwissProt top hitse value%identityAlignment
Q42410 Zinc finger protein ZAT125.6e-1751.09Show/hide
Query:  GQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRVTVSGGGFSPMTAA
        G    VF CKTC +QF SFQALGGHRASHK+P   A       +V     K   H C  CG+EF  GQALGGHMRRHR      G + +T A
Subjt:  GQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRVTVSGGGFSPMTAA

Q681X4 Zinc finger protein ZAT59.9e-2248.03Show/hide
Query:  KIQGQNPA--VFECKTCNRQFPSFQALGGHRASHKRPRTAAEE--------PKDPA--EVGRDQFK-----------------QKMHECATCGLEFSSGQ
        KI  +N +  V+ECKTCNR F SFQALGGHRASHK+PRT+ EE        PK  A  E     FK                  K+HEC+ CG EF+SGQ
Subjt:  KIQGQNPA--VFECKTCNRQFPSFQALGGHRASHKRPRTAAEE--------PKDPA--EVGRDQFK-----------------QKMHECATCGLEFSSGQ

Query:  ALGGHMRRHRVTVSGGGFSPMTAAEKI
        ALGGHMRRHR  V+    SP+ A  ++
Subjt:  ALGGHMRRHRVTVSGGGFSPMTAAEKI

Q9LFG0 Zinc finger protein ZAT181.9e-1754.67Show/hide
Query:  FECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRVTV
        FECKTCNR+F SFQALGGHRASHK+P+       D  +V     +  MH+C  C   F +GQALGGHMR+HR ++
Subjt:  FECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRVTV

Q9LX85 Zinc finger protein ZAT82.4e-1552.44Show/hide
Query:  GQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQ----KMHECATCGLEFSSGQALGGHMRRHR
        G    VF CKTC ++F SFQALGGHRASHK+   ++    DP+ +G    K+      H C  CG+EF  GQALGGHMRRHR
Subjt:  GQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQ----KMHECATCGLEFSSGQALGGHMRRHR

Q9SLD4 Zinc finger protein ZAT111.6e-1955.29Show/hide
Query:  FECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHR--VTVSGGGFSPM
        FECKTCN++F SFQALGGHRASHK+P+   E+ KD   +  D      H+C+ C   F +GQALGGHMRRHR  +TV     SPM
Subjt:  FECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHR--VTVSGGGFSPM

Arabidopsis top hitse value%identityAlignment
AT2G28200.1 C2H2-type zinc finger family protein7.0e-2348.03Show/hide
Query:  KIQGQNPA--VFECKTCNRQFPSFQALGGHRASHKRPRTAAEE--------PKDPA--EVGRDQFK-----------------QKMHECATCGLEFSSGQ
        KI  +N +  V+ECKTCNR F SFQALGGHRASHK+PRT+ EE        PK  A  E     FK                  K+HEC+ CG EF+SGQ
Subjt:  KIQGQNPA--VFECKTCNRQFPSFQALGGHRASHKRPRTAAEE--------PKDPA--EVGRDQFK-----------------QKMHECATCGLEFSSGQ

Query:  ALGGHMRRHRVTVSGGGFSPMTAAEKI
        ALGGHMRRHR  V+    SP+ A  ++
Subjt:  ALGGHMRRHRVTVSGGGFSPMTAAEKI

AT2G28710.1 C2H2-type zinc finger family protein1.1e-2058.43Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRVTVSGGG---FSPMTA
        VF CKTCN++FPSFQALGGHRASH+  R+AA E   P    R   K   HEC  CG EF+ GQALGGHMR+HR    GGG    +P TA
Subjt:  VFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRVTVSGGG---FSPMTA

AT2G37430.1 C2H2 and C2HC zinc fingers superfamily protein1.1e-2055.29Show/hide
Query:  FECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHR--VTVSGGGFSPM
        FECKTCN++F SFQALGGHRASHK+P+   E+ KD   +  D      H+C+ C   F +GQALGGHMRRHR  +TV     SPM
Subjt:  FECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHR--VTVSGGGFSPM

AT3G53600.1 C2H2-type zinc finger family protein1.4e-1854.67Show/hide
Query:  FECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRVTV
        FECKTCNR+F SFQALGGHRASHK+P+       D  +V     +  MH+C  C   F +GQALGGHMR+HR ++
Subjt:  FECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRVTV

AT5G04390.1 C2H2-type zinc finger family protein3.1e-1844.76Show/hide
Query:  VFECKTCNRQFPSFQALGGHRASHKRPRTAA-----------------------------EEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRR
        V++CKTC+R FPSFQALGGHRASHK+P+ A+                                +     G+   K K+HEC  CG EF+SGQALGGHMRR
Subjt:  VFECKTCNRQFPSFQALGGHRASHKRPRTAA-----------------------------EEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRR

Query:  HRVTV
        HR  V
Subjt:  HRVTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAATTCAGGGCCAAAACCCCGCCGTTTTCGAGTGCAAGACCTGCAACCGGCAGTTCCCGTCGTTCCAGGCCCTCGGCGGCCACCGCGCCAGCCACAAGCGGCCGCGGAC
GGCGGCCGAGGAGCCCAAGGACCCGGCGGAGGTCGGAAGAGATCAGTTCAAGCAGAAAATGCACGAGTGCGCCACGTGCGGGCTGGAGTTCTCGTCCGGGCAGGCTCTCG
GCGGCCACATGAGGCGGCACCGGGTGACGGTGAGCGGCGGCGGGTTTTCTCCGATGACGGCGGCGGAGAAGATT
mRNA sequenceShow/hide mRNA sequence
AAAATTCAGGGCCAAAACCCCGCCGTTTTCGAGTGCAAGACCTGCAACCGGCAGTTCCCGTCGTTCCAGGCCCTCGGCGGCCACCGCGCCAGCCACAAGCGGCCGCGGAC
GGCGGCCGAGGAGCCCAAGGACCCGGCGGAGGTCGGAAGAGATCAGTTCAAGCAGAAAATGCACGAGTGCGCCACGTGCGGGCTGGAGTTCTCGTCCGGGCAGGCTCTCG
GCGGCCACATGAGGCGGCACCGGGTGACGGTGAGCGGCGGCGGGTTTTCTCCGATGACGGCGGCGGAGAAGATT
Protein sequenceShow/hide protein sequence
KIQGQNPAVFECKTCNRQFPSFQALGGHRASHKRPRTAAEEPKDPAEVGRDQFKQKMHECATCGLEFSSGQALGGHMRRHRVTVSGGGFSPMTAAEKI