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MS015903 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015903
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUNC93-like protein 3
Genome locationscaffold943_2:770520..770885
RNA-Seq ExpressionMS015903
SyntenyMS015903
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032619.1 uncharacterized protein E6C27_scaffold184G00030 [Cucumis melo var. makuwa]1.0e-4484.17Show/hide
Query:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
        MLRFL+RRLRSRWPLLV+SASWT+LLTLTVA ASFAPELAFASAISPSSSFAA+CK+       GLVRVPMD+PGDVLCVPD LFRKS IDLIVPPIFAA
Subjt:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA

Query:  VVVAGSACVVRAFGLWADDD
        VVVAGSAC VRA GLWADD+
Subjt:  VVVAGSACVVRAFGLWADDD

XP_004142209.1 uncharacterized protein LOC101207834 [Cucumis sativus]2.6e-4585Show/hide
Query:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
        MLRFL+RRLRSRWPLLV+SASWT+LLTLTVA ASFAPELAFASAISPSSSFAA+CK+       GLVRVPMD+PGDVLCVPD LFRKS IDLIVPPIFAA
Subjt:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA

Query:  VVVAGSACVVRAFGLWADDD
        VVVAGSAC VRA GLWADDD
Subjt:  VVVAGSACVVRAFGLWADDD

XP_022143858.1 uncharacterized protein LOC111013670 [Momordica charantia]1.8e-57100Show/hide
Query:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
        MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
Subjt:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA

Query:  VVVAGSACVVRAFGLWADDDVI
        VVVAGSACVVRAFGLWADDDVI
Subjt:  VVVAGSACVVRAFGLWADDDVI

XP_022963374.1 uncharacterized protein LOC111463600 [Cucurbita moschata]5.0e-4484.17Show/hide
Query:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
        MLR L+RRLRSRWPLLVYSASWTILLTLTVA ASFAPELAFASAISPSSSFA+ CKA       G VRVPMD PGDV+CVPD LFRKS IDLIVPPIFAA
Subjt:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA

Query:  VVVAGSACVVRAFGLWADDD
        VVVAGSAC VRA GLWADDD
Subjt:  VVVAGSACVVRAFGLWADDD

XP_038883336.1 uncharacterized protein LOC120074319 [Benincasa hispida]4.5e-4583.61Show/hide
Query:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
        MLRFL+RRL+SRWPLLVYSASWTILLTLTVA ASFAPELAFASAISPSSSF A CK+       GLVRVPMD+PGDVLCVPD LFRKS IDLIVPPIFAA
Subjt:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA

Query:  VVVAGSACVVRAFGLWADDDVI
        VVVAGSAC VRA GLWADDD +
Subjt:  VVVAGSACVVRAFGLWADDDVI

TrEMBL top hitse value%identityAlignment
A0A0A0L0V5 Uncharacterized protein1.3e-4585Show/hide
Query:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
        MLRFL+RRLRSRWPLLV+SASWT+LLTLTVA ASFAPELAFASAISPSSSFAA+CK+       GLVRVPMD+PGDVLCVPD LFRKS IDLIVPPIFAA
Subjt:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA

Query:  VVVAGSACVVRAFGLWADDD
        VVVAGSAC VRA GLWADDD
Subjt:  VVVAGSACVVRAFGLWADDD

A0A5A7STU5 Uncharacterized protein4.8e-4584.17Show/hide
Query:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
        MLRFL+RRLRSRWPLLV+SASWT+LLTLTVA ASFAPELAFASAISPSSSFAA+CK+       GLVRVPMD+PGDVLCVPD LFRKS IDLIVPPIFAA
Subjt:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA

Query:  VVVAGSACVVRAFGLWADDD
        VVVAGSAC VRA GLWADD+
Subjt:  VVVAGSACVVRAFGLWADDD

A0A6J1CRS0 uncharacterized protein LOC1110136708.5e-58100Show/hide
Query:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
        MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
Subjt:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA

Query:  VVVAGSACVVRAFGLWADDDVI
        VVVAGSACVVRAFGLWADDDVI
Subjt:  VVVAGSACVVRAFGLWADDDVI

A0A6J1HJX3 uncharacterized protein LOC1114636002.4e-4484.17Show/hide
Query:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
        MLR L+RRLRSRWPLLVYSASWTILLTLTVA ASFAPELAFASAISPSSSFA+ CKA       G VRVPMD PGDV+CVPD LFRKS IDLIVPPIFAA
Subjt:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA

Query:  VVVAGSACVVRAFGLWADDD
        VVVAGSAC VRA GLWADDD
Subjt:  VVVAGSACVVRAFGLWADDD

A0A6J1IAZ3 uncharacterized protein LOC1114712539.1e-4483.33Show/hide
Query:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA
        MLR L+RRLRSRWPLLVYSASWTILLTLTVA ASFAPELAFASAISPSSSFA+ CKA       G VRVPM+ PGDV+CVPD LFRKS IDLIVPPIFAA
Subjt:  MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAA

Query:  VVVAGSACVVRAFGLWADDD
        VVVAGSAC VRA GLWADDD
Subjt:  VVVAGSACVVRAFGLWADDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07795.1 unknown protein3.3e-2249.06Show/hide
Query:  RRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAAVVVAGS
        R +  RWP++  +A+WT+LL  TVAVASFAPE+AF S +S S            GGG G V++PMD  G+ +CVP  + ++SR DL VP IFAAV+V  S
Subjt:  RRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAAVVVAGS

Query:  ACVVRA
        AC++R+
Subjt:  ACVVRA

AT2G28725.1 unknown protein1.2e-1641.96Show/hide
Query:  LFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAAVVVA
        +  +  +RW +LV +A+WTILL +TVA+ASFAPE+AF S +  SS               G VR+PMDLPG++L +P  + + S +D+ +P IFA V+V 
Subjt:  LFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAAVVVA

Query:  GSACVVRA-FGL
         S  ++R+ FG+
Subjt:  GSACVVRA-FGL

AT2G37530.1 unknown protein1.4e-2552.38Show/hide
Query:  MLRFLFRRLRSRW----PLLVYSASWTILLTLTVAVASFAPELAFASAISPSSS--FAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIV
        M+R +F  L  R+    P  VY A+WT+ LTLTVA+ S APE AF SAI PSSS  F+ +C      G    + VP+DLP +VLC+P  LFR+S++DL+V
Subjt:  MLRFLFRRLRSRW----PLLVYSASWTILLTLTVAVASFAPELAFASAISPSSS--FAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIV

Query:  PPIFAAVVVAGSACVVRAFGLWADDD
        PP+FAA+VVA SA VVR  GLW  D+
Subjt:  PPIFAAVVVAGSACVVRAFGLWADDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCGATTTCTGTTCAGGCGTCTCAGATCGCGGTGGCCGCTGCTCGTCTACTCCGCCTCCTGGACGATTCTCCTCACGCTGACGGTCGCCGTTGCCTCCTTCGCGCC
GGAGCTCGCCTTTGCGTCTGCGATTTCGCCGTCGTCGTCGTTTGCTGCACAGTGCAAGGCCGGAGTCGGAGGCGGAGGCGGAGGCCTCGTTAGGGTTCCGATGGATTTGC
CGGGAGACGTGCTTTGCGTGCCGGACCTTCTCTTTAGGAAATCCAGGATTGATCTGATCGTTCCCCCGATTTTCGCTGCGGTTGTAGTGGCCGGGTCCGCTTGCGTTGTT
AGGGCCTTCGGCCTATGGGCCGACGATGATGTAATC
mRNA sequenceShow/hide mRNA sequence
ATGCTCCGATTTCTGTTCAGGCGTCTCAGATCGCGGTGGCCGCTGCTCGTCTACTCCGCCTCCTGGACGATTCTCCTCACGCTGACGGTCGCCGTTGCCTCCTTCGCGCC
GGAGCTCGCCTTTGCGTCTGCGATTTCGCCGTCGTCGTCGTTTGCTGCACAGTGCAAGGCCGGAGTCGGAGGCGGAGGCGGAGGCCTCGTTAGGGTTCCGATGGATTTGC
CGGGAGACGTGCTTTGCGTGCCGGACCTTCTCTTTAGGAAATCCAGGATTGATCTGATCGTTCCCCCGATTTTCGCTGCGGTTGTAGTGGCCGGGTCCGCTTGCGTTGTT
AGGGCCTTCGGCCTATGGGCCGACGATGATGTAATC
Protein sequenceShow/hide protein sequence
MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVGGGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAAVVVAGSACVV
RAFGLWADDDVI