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MS015927 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015927
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUPF0161 protein At3g09310
Genome locationscaffold943_2:960336..961111
RNA-Seq ExpressionMS015927
SyntenyMS015927
Gene Ontology termsNA
InterPro domainsIPR002696 - Putative membrane protein insertion efficiency factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142065.1 UPF0161 protein At3g09310 isoform X1 [Cucumis sativus]4.3e-6684.21Show/hide
Query:  MAVLPTTNCHRPQNQNPIFFT---HQSHCS-AGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT
        MAVLPTTNCH  QN NPIFF    HQ  CS AGF+IRFN RKLRR LIL E+RA  NSSANS+QDGEVDNLGV+AALS+LKFYKREISPLLP SCRYLPT
Subjt:  MAVLPTTNCHRPQNQNPIFFT---HQSHCS-AGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT

Query:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED
        CSEYSMQAYKKYGV KGTILTAWRLCRCNPLGGSGFDPPRWFDEE  PEPED
Subjt:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED

XP_008448003.1 PREDICTED: UPF0161 protein At3g09310 [Cucumis melo]4.3e-6682.24Show/hide
Query:  MAVLPTTNCHRPQNQNPIFFTHQSH----CSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT
        MAVLPTTNC+ PQN NPIFFT + H     +AGF+IRFN RKLRRPLIL E+RA   SSANS+QDGEVDNLGV+AALS+LKFYKREISPLLP SCRYLPT
Subjt:  MAVLPTTNCHRPQNQNPIFFTHQSH----CSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT

Query:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED
        CSEYSMQAYKKYGV KGT+LTAWRLCRCNPLGGSGFDPPRWFDEE  PEPED
Subjt:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED

XP_022143725.1 UPF0161 protein At3g09310 [Momordica charantia]1.9e-8299.32Show/hide
Query:  MAVLPTTNCHRPQNQNPIFFTHQSHCSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPTCSEY
        MAVLPTTNCHRPQNQNPIFFTHQSHCSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLG+RAALSVLKFYKREISPLLPKSCRYLPTCSEY
Subjt:  MAVLPTTNCHRPQNQNPIFFTHQSHCSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPTCSEY

Query:  SMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED
        SMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED
Subjt:  SMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED

XP_022931846.1 UPF0161 protein At3g09310 [Cucurbita moschata]4.3e-6682.89Show/hide
Query:  MAVLPTTNCHRPQNQNPIFFT---HQSHCS-AGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT
        MAVLPTTNCH+ QNQNPIFF     +SH S A F+IRFNG+KLRRPLI+ E+RA  NSSAN +QDGEVDNLGV+AALS+LKFYKREISPLLP SCRYLPT
Subjt:  MAVLPTTNCHRPQNQNPIFFT---HQSHCS-AGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT

Query:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED
        CSEYSMQAYKKYGV KGTILTAWRLCRCNPLGGSGFDPPRWFDEE  PEPED
Subjt:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED

XP_023518310.1 UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo]2.8e-6582.89Show/hide
Query:  MAVLPTTNCHRPQNQNPIFFT---HQSHCS-AGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT
        MAVLPTTNCH+ QNQNPIFF    HQS  S A F+IRFNG+KLRRPLI+ ESRA  NSSAN +QDGEVDNLGV+AALS+LKFYKREISPLLP SCRYLPT
Subjt:  MAVLPTTNCHRPQNQNPIFFT---HQSHCS-AGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT

Query:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED
        CSEYSMQAYKKYGV KGTILTAWRLCRCNP G SGFDPPRWFDEE  PEPED
Subjt:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED

TrEMBL top hitse value%identityAlignment
A0A0A0KXI4 Uncharacterized protein2.1e-6684.21Show/hide
Query:  MAVLPTTNCHRPQNQNPIFFT---HQSHCS-AGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT
        MAVLPTTNCH  QN NPIFF    HQ  CS AGF+IRFN RKLRR LIL E+RA  NSSANS+QDGEVDNLGV+AALS+LKFYKREISPLLP SCRYLPT
Subjt:  MAVLPTTNCHRPQNQNPIFFT---HQSHCS-AGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT

Query:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED
        CSEYSMQAYKKYGV KGTILTAWRLCRCNPLGGSGFDPPRWFDEE  PEPED
Subjt:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED

A0A1S3BJN3 UPF0161 protein At3g093102.1e-6682.24Show/hide
Query:  MAVLPTTNCHRPQNQNPIFFTHQSH----CSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT
        MAVLPTTNC+ PQN NPIFFT + H     +AGF+IRFN RKLRRPLIL E+RA   SSANS+QDGEVDNLGV+AALS+LKFYKREISPLLP SCRYLPT
Subjt:  MAVLPTTNCHRPQNQNPIFFTHQSH----CSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT

Query:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED
        CSEYSMQAYKKYGV KGT+LTAWRLCRCNPLGGSGFDPPRWFDEE  PEPED
Subjt:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED

A0A5A7STY4 UPF0161 protein1.9e-6479.11Show/hide
Query:  MAVLPTTNCHRPQNQNPIFFTHQSH----CSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT
        MAVLPTTNC+ PQN NPIFFT + H     +AGF+IRFN RKLRRPLIL E+RA   SSANS+QDGEVDNLGV+AALS+LKFYKREISPLLP SCRYLPT
Subjt:  MAVLPTTNCHRPQNQNPIFFTHQSH----CSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT

Query:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPL------GGSGFDPPRWFDEESFPEPED
        CSEYSMQAYKKYGV KGT+LTAWRLCRCNPL      GGSGFDPPRWFDEE  PEPED
Subjt:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPL------GGSGFDPPRWFDEESFPEPED

A0A6J1CPK9 UPF0161 protein At3g093109.3e-8399.32Show/hide
Query:  MAVLPTTNCHRPQNQNPIFFTHQSHCSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPTCSEY
        MAVLPTTNCHRPQNQNPIFFTHQSHCSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLG+RAALSVLKFYKREISPLLPKSCRYLPTCSEY
Subjt:  MAVLPTTNCHRPQNQNPIFFTHQSHCSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPTCSEY

Query:  SMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED
        SMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED
Subjt:  SMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED

A0A6J1EUS1 UPF0161 protein At3g093102.1e-6682.89Show/hide
Query:  MAVLPTTNCHRPQNQNPIFFT---HQSHCS-AGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT
        MAVLPTTNCH+ QNQNPIFF     +SH S A F+IRFNG+KLRRPLI+ E+RA  NSSAN +QDGEVDNLGV+AALS+LKFYKREISPLLP SCRYLPT
Subjt:  MAVLPTTNCHRPQNQNPIFFT---HQSHCS-AGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPT

Query:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED
        CSEYSMQAYKKYGV KGTILTAWRLCRCNPLGGSGFDPPRWFDEE  PEPED
Subjt:  CSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED

SwissProt top hitse value%identityAlignment
B0K5N7 Putative membrane protein insertion efficiency factor9.4e-1653.33Show/hide
Query:  VLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDP
        ++K Y+R ISP+ P+SCR+ PTCS+YS++A  KYG+ KG I++ WR+ RCNP    G+DP
Subjt:  VLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDP

B0K8I2 Putative membrane protein insertion efficiency factor9.4e-1653.33Show/hide
Query:  VLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDP
        ++K Y+R ISP+ P+SCR+ PTCS+YS++A  KYG+ KG I++ WR+ RCNP    G+DP
Subjt:  VLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDP

B0T0Z8 Putative membrane protein insertion efficiency factor6.5e-1761.67Show/hide
Query:  LKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPP
        LK YK  +SP + + CRYLPTCSEY+ QA K +G  KG+ L   R+CRCNPLGGSG+DPP
Subjt:  LKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPP

Q2S3T2 Putative membrane protein insertion efficiency factor3.5e-1852.17Show/hide
Query:  LSVLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEE
        + +++ Y+  +SP L ++CR+ PTCS Y++QA+++YG  KG +LT  RL RC+P GG G+DPPRWFDEE
Subjt:  LSVLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDEE

Q9SR32 UPF0161 protein At3g093103.7e-3678.57Show/hide
Query:  SEQDG-EVDNLGVRAALSVLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDE
        S QDG E++++GV+AAL++L+FYKREISP+LP+SCRY+PTCSEYSM+AYKKYGV KGT+LT WRLCRCNPLGGSGFDPPRWF E
Subjt:  SEQDG-EVDNLGVRAALSVLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDE

Arabidopsis top hitse value%identityAlignment
AT3G09310.1 unknown protein2.6e-3778.57Show/hide
Query:  SEQDG-EVDNLGVRAALSVLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDE
        S QDG E++++GV+AAL++L+FYKREISP+LP+SCRY+PTCSEYSM+AYKKYGV KGT+LT WRLCRCNPLGGSGFDPPRWF E
Subjt:  SEQDG-EVDNLGVRAALSVLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGVTKGTILTAWRLCRCNPLGGSGFDPPRWFDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCTTCCCACCACAAACTGCCACAGACCCCAAAACCAGAACCCGATCTTCTTCACCCATCAAAGCCACTGCTCCGCCGGCTTCGCCATTCGGTTTAATGGCCG
GAAACTCCGGCGGCCCTTAATCCTCTGTGAATCGCGCGCCAAAAGGAATTCAAGCGCGAACAGCGAGCAAGACGGTGAAGTGGACAATCTGGGGGTTAGAGCTGCATTAT
CCGTGCTTAAGTTCTACAAACGAGAAATCTCGCCGCTATTGCCAAAAAGCTGTCGCTATCTACCTACATGTAGTGAGTATTCTATGCAAGCTTACAAGAAATATGGTGTT
ACGAAGGGCACCATCTTGACTGCTTGGCGCCTCTGTCGCTGTAATCCTCTTGGTGGATCTGGCTTTGATCCTCCGCGGTGGTTTGATGAAGAAAGCTTTCCAGAACCAGA
AGAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCTTCCCACCACAAACTGCCACAGACCCCAAAACCAGAACCCGATCTTCTTCACCCATCAAAGCCACTGCTCCGCCGGCTTCGCCATTCGGTTTAATGGCCG
GAAACTCCGGCGGCCCTTAATCCTCTGTGAATCGCGCGCCAAAAGGAATTCAAGCGCGAACAGCGAGCAAGACGGTGAAGTGGACAATCTGGGGGTTAGAGCTGCATTAT
CCGTGCTTAAGTTCTACAAACGAGAAATCTCGCCGCTATTGCCAAAAAGCTGTCGCTATCTACCTACATGTAGTGAGTATTCTATGCAAGCTTACAAGAAATATGGTGTT
ACGAAGGGCACCATCTTGACTGCTTGGCGCCTCTGTCGCTGTAATCCTCTTGGTGGATCTGGCTTTGATCCTCCGCGGTGGTTTGATGAAGAAAGCTTTCCAGAACCAGA
AGAT
Protein sequenceShow/hide protein sequence
MAVLPTTNCHRPQNQNPIFFTHQSHCSAGFAIRFNGRKLRRPLILCESRAKRNSSANSEQDGEVDNLGVRAALSVLKFYKREISPLLPKSCRYLPTCSEYSMQAYKKYGV
TKGTILTAWRLCRCNPLGGSGFDPPRWFDEESFPEPED