; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015930 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015930
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome b6
Genome locationscaffold943_2:974690..974836
RNA-Seq ExpressionMS015930
SyntenyMS015930
Gene Ontology termsGO:0022904 - respiratory electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016020 - membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR005797 - Cytochrome b/b6, N-terminal
IPR016174 - Di-haem cytochrome, transmembrane
IPR023530 - Cytochrome b6, PetB
IPR027387 - Cytochrome b/b6-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD49686.1 TPA_asm: hypothetical protein HUJ06_031965 [Nelumbo nucifera]5.1e-0871.43Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GV+LA+L ASFGVTGYSLP +QI Y  VKIV  V EAI +IESP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
MBA0624423.1 hypothetical protein [Gossypium davidsonii]5.1e-0871.43Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVL +L ASFGVTGYSLP +QI Y  VKIV  VLEAI +I SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
QID76248.1 cytochrome b6 [Castanea mollissima]1.1e-0771.43Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVLA+L ASFGVTGYSLP +QI Y  VKIV  V EAI +I SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
XP_038896373.1 LOW QUALITY PROTEIN: cytochrome b6-like [Benincasa hispida]6.7e-0871.43Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVL +L ASFGVTGYSLP +QI Y  VKIV  VLEAI +I SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
YP_010011889.1 cytochrome b6 [Melissa yunnanensis]8.7e-0872.92Show/hide
Query:  TWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        TWV GVVLA+L ASFGVTGYSLP +QI Y  VKIVI V EAI +I SP
Subjt:  TWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
TrEMBL top hitse value%identityAlignment
A0A1Y1CUX3 Cytochrome b65.5e-0873.47Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVLA+L ASFGVTGYSLP +QI Y  VKIV  V EAI II SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
A0A2Z5WMV3 Cytochrome b65.5e-0873.47Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVLA+L ASFGVTGYSLP +QI Y  VKIV  V EAI II SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
A0A2Z5WN64 Cytochrome b65.5e-0873.47Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVLA+L ASFGVTGYSLP +QI Y  VKIV  V EAI II SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
A0A7J8SEW3 CYTB_NTER domain-containing protein (Fragment)2.5e-0871.43Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVL +L ASFGVTGYSLP +QI Y  VKIV  VLEAI +I SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
A0A7L8XSS8 Cytochrome b64.2e-0872.92Show/hide
Query:  TWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        TWV GVVLA+L ASFGVTGYSLP +QI Y  VKIVI V EAI +I SP
Subjt:  TWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
SwissProt top hitse value%identityAlignment
A0A365 Cytochrome b62.0e-1071.43Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVLA+L ASFGVTGYSLP +QI Y  VKIV  V EAI +I SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
Q0G9T2 Cytochrome b62.0e-1071.43Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVLA+L ASFGVTGYSLP +QI Y  VKIV  V EAI +I SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
Q4VZI6 Cytochrome b62.0e-1071.43Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVLA+L ASFGVTGYSLP +QI Y  VKIV  V EAI +I SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
Q68RX7 Cytochrome b62.0e-1071.43Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVLA+L ASFGVTGYSLP +QI Y  VKIV  V EAI +I SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
Q70XX8 Cytochrome b61.5e-1073.47Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVLA+L ASFGVTGYSLP +QI Y  VKIV  V EAI II SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
Arabidopsis top hitse value%identityAlignment
ATCG00720.1 photosynthetic electron transfer B1.5e-1067.35Show/hide
Query:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP
        LTWV GVVL +L ASFGVTGYSLP +QI Y  VKIV  V +AI +I SP
Subjt:  LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGACTTGGGTTAGAGGTGTGGTTCTGGCTATATTGATCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCCGAACCAAATTAGTTATTTGACAGTCAAAATTGTAAT
AGATGTATTGGAAGCCATTTCAATAATAGAGTCGCCA
mRNA sequenceShow/hide mRNA sequence
CTGACTTGGGTTAGAGGTGTGGTTCTGGCTATATTGATCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCCGAACCAAATTAGTTATTTGACAGTCAAAATTGTAAT
AGATGTATTGGAAGCCATTTCAATAATAGAGTCGCCA
Protein sequenceShow/hide protein sequence
LTWVRGVVLAILIASFGVTGYSLPPNQISYLTVKIVIDVLEAISIIESP