; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015933 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015933
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCyclin-dependent kinase inhibitor
Genome locationscaffold943_2:992233..992466
RNA-Seq ExpressionMS015933
SyntenyMS015933
Gene Ontology termsGO:0006620 - posttranslational protein targeting to endoplasmic reticulum membrane (biological process)
GO:0030433 - ubiquitin-dependent ERAD pathway (biological process)
GO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0072380 - TRC complex (cellular component)
GO:0060090 - molecular adaptor activity (molecular function)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032664.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]4.2e-2071.79Show/hide
Query:  ISPPEMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEACA
        +S PEMEKTD   N DECLTP+  ACRIP  SKCPPPPKKK   GRK  PPTSGYF PPDLDALFS+PP  S  EACA
Subjt:  ISPPEMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEACA

KAF3449173.1 hypothetical protein FNV43_RR09901 [Rhamnella rubrinervis]1.3e-1363.93Show/hide
Query:  NDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGC
        +DDEC TP+ R CRIPV   CPPPPKKK   G K+ PP  GYF PPDLDALF MPP    C
Subjt:  NDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGC

KAF4373031.1 hypothetical protein F8388_011058 [Cannabis sativa]4.2e-1254.05Show/hide
Query:  EMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEACA
        E E++D    +D C TP+ R CRIP    CPPPPKKK  +G K+ PP +GYFHPPDLD+LF +P   S  +ACA
Subjt:  EMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEACA

KAG6603646.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2077.03Show/hide
Query:  MEKTDAKS--NDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEAC
        MEKTDA+S  N +ECLTPR  A RIP ASKCPPPPKKK   GRKQ PPTSGYFHPPDLDALFSMPP  S  EAC
Subjt:  MEKTDAKS--NDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEAC

KGN54563.2 hypothetical protein Csa_017876 [Cucumis sativus]9.3e-2073.91Show/hide
Query:  ISPPEMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPP
        +SPPEMEKTD   N DECLTP+  ACRIP   KCPPPPKKK F GRK  PPT GYF PPDLD LFSMPP
Subjt:  ISPPEMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPP

TrEMBL top hitse value%identityAlignment
A0A0A0KXI9 Uncharacterized protein1.5e-2071.43Show/hide
Query:  ISPPEMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEAC
        +SPPEMEKTD   N DECLTP+  ACRIP   KCPPPPKKK F GRK  PPT GYF PPDLD LFSMPP  S  EAC
Subjt:  ISPPEMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEAC

A0A2N9GK17 Uncharacterized protein1.5e-1262.5Show/hide
Query:  NDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPP
        ++  C TP+ R C+IPV   CPPPPKKK  +G K+ PP +GYFHPPDLDALF+MPP
Subjt:  NDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPP

A0A2P5APV6 Cyclin-dependent kinase inhibitor2.0e-1257.81Show/hide
Query:  DDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEACA
        +++C TP+ R CRIP AS CPPPPKKK  +G K+ PP +GYF PPDLD+LF+  P  S  +ACA
Subjt:  DDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEACA

A0A5A7SNA9 Cyclin-dependent protein kinase inhibitor SMR22.0e-2071.79Show/hide
Query:  ISPPEMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEACA
        +S PEMEKTD   N DECLTP+  ACRIP  SKCPPPPKKK   GRK  PPTSGYF PPDLDALFS+PP  S  EACA
Subjt:  ISPPEMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEACA

A0A7J6H051 Uncharacterized protein2.0e-1254.05Show/hide
Query:  EMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEACA
        E E++D    +D C TP+ R CRIP    CPPPPKKK  +G K+ PP +GYFHPPDLD+LF +P   S  +ACA
Subjt:  EMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEACA

SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR42.2e-1149.3Show/hide
Query:  MEKTDAKSN--DDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGC
        ME  + K+   ++ C TPR    RIPVAS CPPPP+KK    RK+ PP +GYF PPDL+ LF   P    C
Subjt:  MEKTDAKSN--DDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGC

Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR59.4e-0744.62Show/hide
Query:  DAKSNDDE----CLTPRGRACRIPVASKCPPPPKKKPFA---GRKQTPPTSGYFHPPDLDALFSM
        D  + DD+    C TP    CRIP    CPPP ++K      G+K+ PP  GYF PPDLD  FS+
Subjt:  DAKSNDDE----CLTPRGRACRIPVASKCPPPPKKKPFA---GRKQTPPTSGYFHPPDLDALFSM

Arabidopsis top hitse value%identityAlignment
AT5G02220.1 unknown protein1.5e-1249.3Show/hide
Query:  MEKTDAKSN--DDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGC
        ME  + K+   ++ C TPR    RIPVAS CPPPP+KK    RK+ PP +GYF PPDL+ LF   P    C
Subjt:  MEKTDAKSN--DDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTCGCCGCCGGAAATGGAGAAGACCGATGCGAAGAGCAACGACGACGAGTGCCTGACTCCCAGGGGCCGGGCTTGTAGGATCCCGGTGGCGTCCAAATGTCCCCCGCC
GCCTAAGAAGAAACCGTTCGCCGGACGGAAGCAGACCCCTCCGACGAGCGGCTATTTCCACCCTCCCGATCTCGATGCTCTGTTTTCCATGCCACCGCCTTTATCAGGAT
GTGAGGCTTGCGCT
mRNA sequenceShow/hide mRNA sequence
ATTTCGCCGCCGGAAATGGAGAAGACCGATGCGAAGAGCAACGACGACGAGTGCCTGACTCCCAGGGGCCGGGCTTGTAGGATCCCGGTGGCGTCCAAATGTCCCCCGCC
GCCTAAGAAGAAACCGTTCGCCGGACGGAAGCAGACCCCTCCGACGAGCGGCTATTTCCACCCTCCCGATCTCGATGCTCTGTTTTCCATGCCACCGCCTTTATCAGGAT
GTGAGGCTTGCGCT
Protein sequenceShow/hide protein sequence
ISPPEMEKTDAKSNDDECLTPRGRACRIPVASKCPPPPKKKPFAGRKQTPPTSGYFHPPDLDALFSMPPPLSGCEACA