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MS015943 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015943
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAvr9/Cf-9 rapidly elicited protein
Genome locationscaffold943_2:1040043..1040186
RNA-Seq ExpressionMS015943
SyntenyMS015943
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032674.1 Avr9/Cf-9 rapidly elicited protein [Cucumis melo var. makuwa]2.1e-0662.5Show/hide
Query:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
        LV QS  I KKG+KEL+RFPSGIR KDDIGIG  +F S T    R+ T
Subjt:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
XP_004142198.1 uncharacterized protein LOC101204955 [Cucumis sativus]8.6e-0864.58Show/hide
Query:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
        LV QS  I KKG+KEL+RFPSGIR KDD+GIGY +F S T E  R+ T
Subjt:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
XP_008449997.1 PREDICTED: uncharacterized protein LOC103491711, partial [Cucumis melo]2.1e-0662.5Show/hide
Query:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
        LV QS  I KKG+KEL+RFPSGIR KDDIGIG  +F S T    R+ T
Subjt:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
XP_038883935.1 uncharacterized protein LOC120074765 [Benincasa hispida]2.3e-0866.67Show/hide
Query:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
        LV QS  I KKG+KEL+RFPSGIR KDDIGIGY +F S TG   R+ T
Subjt:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
TrEMBL top hitse value%identityAlignment
A0A0A0L0Z9 Uncharacterized protein4.1e-0864.58Show/hide
Query:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
        LV QS  I KKG+KEL+RFPSGIR KDD+GIGY +F S T E  R+ T
Subjt:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
A0A1S3BMP0 uncharacterized protein LOC1034917111.0e-0662.5Show/hide
Query:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
        LV QS  I KKG+KEL+RFPSGIR KDDIGIG  +F S T    R+ T
Subjt:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
A0A5D3DIU8 Avr9/Cf-9 rapidly elicited protein1.0e-0662.5Show/hide
Query:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
        LV QS  I KKG+KEL+RFPSGIR KDDIGIG  +F S T    R+ T
Subjt:  LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCGTGATGCAATCGGACTCAATCGCAAAGAAGGGGGAGAAGGAATTAATCCGATTTCCAAGTGGGATTAGAGTGAAAGACGACATCGGAATTGGGTACAAACAATTCAA
ATCACCAACGGGTGAGAAACCGCGGTTAATAACA
mRNA sequenceShow/hide mRNA sequence
CTCGTGATGCAATCGGACTCAATCGCAAAGAAGGGGGAGAAGGAATTAATCCGATTTCCAAGTGGGATTAGAGTGAAAGACGACATCGGAATTGGGTACAAACAATTCAA
ATCACCAACGGGTGAGAAACCGCGGTTAATAACA
Protein sequenceShow/hide protein sequence
LVMQSDSIAKKGEKELIRFPSGIRVKDDIGIGYKQFKSPTGEKPRLIT