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MS015948 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015948
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold582:69234..69482
RNA-Seq ExpressionMS015948
SyntenyMS015948
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF6171198.1 hypothetical protein GIB67_001913 [Kingdonia uniflora]2.9e-1148.84Show/hide
Query:  GTGFSYWKDQIVDYLHFKDLELPL---DKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN
        G+ F  WK QI DYL+ KDL+LPL   + K  D + AKW +LDRKALGT+ L L+  +   ++K T T GLM TL ++Y +PS  N
Subjt:  GTGFSYWKDQIVDYLHFKDLELPL---DKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN

KYP39959.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]1.3e-1150Show/hide
Query:  GTGFSYWKDQIVDYLHFKDLELPLD-KKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN
        GT F +WK QI DYL+ K L  PL+ KK   M++ +W  LDR+ALG I LTL++ +  ++ K+  T+GLMT L S+YEKPS +N
Subjt:  GTGFSYWKDQIVDYLHFKDLELPLD-KKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN

VDD56318.1 unnamed protein product [Brassica oleracea]7.6e-1246.99Show/hide
Query:  GTGFSYWKDQIVDYLHFKDLELPLDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN
        GT +++W+ QI DYL+ K L  PL KK   +++ +WE LDR+ LG I LTL+K +  ++ K+  T GLM  L  +YEKPS NN
Subjt:  GTGFSYWKDQIVDYLHFKDLELPLDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN

XP_022152845.1 uncharacterized protein LOC111020469 [Momordica charantia]1.4e-1363.01Show/hide
Query:  IVDYLHFKDLELPLDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN
        ++DYLH K+LE PL+ K  DM E +W+KLDRK LGTI LTLTK +QSS+  KT TMGLM  L ++YEK SVNN
Subjt:  IVDYLHFKDLELPLDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN

XP_041025263.1 uncharacterized protein LOC121265638 [Juglans microcarpa x Juglans regia]9.9e-1250Show/hide
Query:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN
        GT F YWK QI DYL+ K L LP L KK   M +A+W  LDR+ LG + LTL++ +  +++K+  T+ LM TL  +YEKPS NN
Subjt:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN

TrEMBL top hitse value%identityAlignment
A0A2N9FA13 Uncharacterized protein3.9e-1454.76Show/hide
Query:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN
        GT F YWK QI DYL+ K L LP L KK   ME+A+W  LDR+ LG I LTL++ +  ++ K+T T+GLMT L  +YEKPS NN
Subjt:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN

A0A2N9G318 CCHC-type domain-containing protein3.9e-1454.76Show/hide
Query:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN
        GT F YWK QI DYL+ K L LP L KK   ME+A+W  LDR+ LG I LTL++ +  ++ K+T T+GLMT L  +YEKPS NN
Subjt:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN

A0A2N9G6J0 CCHC-type domain-containing protein3.9e-1454.76Show/hide
Query:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN
        GT F YWK QI DYL+ K L LP L KK   ME+A+W  LDR+ LG I LTL++ +  ++ K+T T+GLMT L  +YEKPS NN
Subjt:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN

A0A2N9GZ72 Uncharacterized protein3.0e-1454.76Show/hide
Query:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN
        GT F YWK QI DYL+ K L LP L KK   ME+A+W  LDR+ LG I LTL++ +  ++ K+T T+GLMT L  +YEKPS NN
Subjt:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN

A0A2N9IQA4 Uncharacterized protein3.5e-1555.95Show/hide
Query:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN
        GT F YWK QI DYL+ K L LP L KK   ME+A+W  LDR+ LG I LTL++ +  ++ K+T TMGLMT L+ +YEKPS NN
Subjt:  GTGFSYWKDQIVDYLHFKDLELP-LDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAACTGGTTTTTCATACTGGAAGGATCAGATAGTAGATTATCTACATTTCAAGGATTTGGAATTGCCATTAGACAAGAAGTCAGCTGACATGGAAGAAGCCAAATGGGA
AAAGTTGGATAGGAAGGCGTTGGGTACAATTTCGCTAACATTAACAAAATATTTGCAGAGCAGCTTAACTAAGAAGACTATTACAATGGGGCTGATGACTACATTGTACA
GCATATATGAGAAGCCCTCAGTAAATAAT
mRNA sequenceShow/hide mRNA sequence
GGAACTGGTTTTTCATACTGGAAGGATCAGATAGTAGATTATCTACATTTCAAGGATTTGGAATTGCCATTAGACAAGAAGTCAGCTGACATGGAAGAAGCCAAATGGGA
AAAGTTGGATAGGAAGGCGTTGGGTACAATTTCGCTAACATTAACAAAATATTTGCAGAGCAGCTTAACTAAGAAGACTATTACAATGGGGCTGATGACTACATTGTACA
GCATATATGAGAAGCCCTCAGTAAATAAT
Protein sequenceShow/hide protein sequence
GTGFSYWKDQIVDYLHFKDLELPLDKKSADMEEAKWEKLDRKALGTISLTLTKYLQSSLTKKTITMGLMTTLYSIYEKPSVNN