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MS015959 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015959
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold582:205704..205868
RNA-Seq ExpressionMS015959
SyntenyMS015959
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP54501.1 Transposon TX1 uncharacterized [Cajanus cajan]1.2e-0555.56Show/hide
Query:  RHMMEYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
        RH+ ++  ISLCNV +K ISKVLVN ++ I N I+SP QS+F+LG    DN IL
Subjt:  RHMMEYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
OMO80770.1 reverse transcriptase [Corchorus capsularis]1.2e-0560Show/hide
Query:  EYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
        +Y  ISLCNV+YK IS+VLVN MK++ N +ISP QSAFI G    DN I+
Subjt:  EYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
XP_023908235.1 uncharacterized protein LOC112019924 [Quercus suber]1.2e-0559.62Show/hide
Query:  MMEYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
        M ++  ISLCNV YK ISKVLVN +KQ+  NIISP QSAF+ G    DN +L
Subjt:  MMEYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
XP_042964797.1 uncharacterized protein LOC122299028 [Carya illinoinensis]3.5e-0557.69Show/hide
Query:  MMEYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
        ++EY  ISLCN  YK ISKVLVN +K +   IISPNQ+AFILG   +DN ++
Subjt:  MMEYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
XP_042974642.1 uncharacterized protein LOC122306274 [Carya illinoinensis]1.6e-0556Show/hide
Query:  EYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
        +Y  ISLCNV YK +SKVL N +K++ NN++SPNQSAFILG    +N ++
Subjt:  EYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
TrEMBL top hitse value%identityAlignment
A0A0A8XR28 Reverse transcriptase domain-containing protein9.9e-0660.87Show/hide
Query:  ISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
        ISLCNV YK  SKVL NW+KQI ++II+P+QSAF+ G    DN +L
Subjt:  ISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
A0A0A9SQ65 Reverse transcriptase domain-containing protein9.9e-0660.87Show/hide
Query:  ISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
        ISLCNV YK  SKVL NW+KQI ++II+P+QSAF+ G    DN +L
Subjt:  ISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
A0A151SIE2 Transposon TX1 uncharacterized5.8e-0655.56Show/hide
Query:  RHMMEYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
        RH+ ++  ISLCNV +K ISKVLVN ++ I N I+SP QS+F+LG    DN IL
Subjt:  RHMMEYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
A0A1R3IDY9 Reverse transcriptase5.8e-0660Show/hide
Query:  EYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
        +Y  ISLCNV+YK IS+VLVN MK++ N +ISP QSAFI G    DN I+
Subjt:  EYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
A0A2N9INH4 Reverse transcriptase domain-containing protein1.3e-0549.06Show/hide
Query:  HMMEYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
        H+ +Y  ISLCNV YK ISKVL NW+K++   +I+  QSAF+ G    DN ++
Subjt:  HMMEYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCACGTCACATGATGGAATATGGGCTCATCTCTCTTTGCAATGTTAGCTACAAAACCATTTCCAAAGTCCTTGTTAATTGGATGAAGCAAATCCATAATAATATTATTAG
CCCAAATCAAAGTGCCTTCATTCTTGGCGGGTGTAATGTGGATAACACTATTTTG
mRNA sequenceShow/hide mRNA sequence
TCACGTCACATGATGGAATATGGGCTCATCTCTCTTTGCAATGTTAGCTACAAAACCATTTCCAAAGTCCTTGTTAATTGGATGAAGCAAATCCATAATAATATTATTAG
CCCAAATCAAAGTGCCTTCATTCTTGGCGGGTGTAATGTGGATAACACTATTTTG
Protein sequenceShow/hide protein sequence
SRHMMEYGLISLCNVSYKTISKVLVNWMKQIHNNIISPNQSAFILGGCNVDNTIL