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MS015970 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015970
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold16:49819..50046
RNA-Seq ExpressionMS015970
SyntenyMS015970
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]2.2e-0531.43Show/hide
Query:  NQPQLRWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR
        N   +RW  P    W LN DA+W+E  + G + W+L +  G+I++AG   +     +  +E M ++ GL+
Subjt:  NQPQLRWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]6.3e-0535.38Show/hide
Query:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR
        RW+ P   +W LN DAAW  +  T  + W+L + +G++I  G + +    ++  +E MA+ EGLR
Subjt:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]6.3e-0535.38Show/hide
Query:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR
        RW+ P   +W LN DAAW  +  T  + W+L + +G++I  G + +    ++  +E MA+ EGLR
Subjt:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.5e-1142.03Show/hide
Query:  QLRWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLRNL
        +L+W+ P    W+LN DA+W+++   G + W++ +W+G I++AG +FV+  ++V+ +EA A+LEGLRNL
Subjt:  QLRWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLRNL

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]2.2e-0536.92Show/hide
Query:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR
        RW+ P   +W LN DAAW  +  TG + W+L + +G++I A  + +    ++  +E MA+ EGLR
Subjt:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR

TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132161.0e-0531.43Show/hide
Query:  NQPQLRWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR
        N   +RW  P    W LN DA+W+E  + G + W+L +  G+I++AG   +     +  +E M ++ GL+
Subjt:  NQPQLRWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X13.0e-0535.38Show/hide
Query:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR
        RW+ P   +W LN DAAW  +  T  + W+L + +G++I  G + +    ++  +E MA+ EGLR
Subjt:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR

A0A6J1DNV9 uncharacterized protein LOC1110224037.5e-1242.03Show/hide
Query:  QLRWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLRNL
        +L+W+ P    W+LN DA+W+++   G + W++ +W+G I++AG +FV+  ++V+ +EA A+LEGLRNL
Subjt:  QLRWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLRNL

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X23.0e-0535.38Show/hide
Query:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR
        RW+ P   +W LN DAAW  +  T  + W+L + +G++I  G + +    ++  +E MA+ EGLR
Subjt:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR

A0A6J1DSV1 uncharacterized protein LOC1110236081.0e-0536.92Show/hide
Query:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR
        RW+ P   +W LN DAAW  +  TG + W+L + +G++I A  + +    ++  +E MA+ EGLR
Subjt:  RWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATCAACCTCAGTTGAGATGGCAACGTCCTAATTTTCTTACCTGGTCTCTCAACGTGGATGCTGCTTGGACTGAGAATCACCAAACGGGAAGGCTAAGATGGGTTCTCTG
GAACTGGGAGGGGCAAATTATCATTGCTGGATACAAATTTGTCGATCATACGAGCAGTGTGAGAACAATGGAGGCTATGGCGTTACTTGAAGGGCTTCGGAACTTAATAC
ATTGGTGG
mRNA sequenceShow/hide mRNA sequence
AATCAACCTCAGTTGAGATGGCAACGTCCTAATTTTCTTACCTGGTCTCTCAACGTGGATGCTGCTTGGACTGAGAATCACCAAACGGGAAGGCTAAGATGGGTTCTCTG
GAACTGGGAGGGGCAAATTATCATTGCTGGATACAAATTTGTCGATCATACGAGCAGTGTGAGAACAATGGAGGCTATGGCGTTACTTGAAGGGCTTCGGAACTTAATAC
ATTGGTGG
Protein sequenceShow/hide protein sequence
NQPQLRWQRPNFLTWSLNVDAAWTENHQTGRLRWVLWNWEGQIIIAGYKFVDHTSSVRTMEAMALLEGLRNLIHWW