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MS015985 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015985
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDDE Tnp4 domain-containing protein
Genome locationscaffold16:282999..283222
RNA-Seq ExpressionMS015985
SyntenyMS015985
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033487.1 uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]2.5e-1460.27Show/hide
Query:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS
        ML+  G L+ T  V+VEE+V IFLHI+AHDVKN+V RRHFA   ET++RH N VLN VL+LHE+LL+QP+ ++
Subjt:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS

KAA0041970.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.3e-1563.01Show/hide
Query:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS
        ML+  G L+ T  V+VEE+VAIFLHI+AHD+KN+V RRHFA   ET++RH NAVLN VL+LHE+LL+QP+P++
Subjt:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS

KAA0050107.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.5e-1664.38Show/hide
Query:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS
        ML+  G L+ T  V+VEE+VAIFLHI+AHDVKN+V RRHFA   ET++RH NAVLN VL+LHE+LL+QP+P++
Subjt:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS

TYK26842.1 uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]2.5e-1460.27Show/hide
Query:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS
        ML+  G L+ T  V+VEE+V IFLHI+AHDVKN+V RRHFA   ET++RH N VLN VL+LHE+LL+QP+ ++
Subjt:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS

XP_008463037.1 PREDICTED: uncharacterized protein LOC103501276 [Cucumis melo]5.0e-1561.64Show/hide
Query:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS
        ML+  G L+ T  V+VEE+VAI LHI+AHDVKNKV RR+FA  +ET++RH N VLN VL+LHE+LL+QP+P++
Subjt:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS

TrEMBL top hitse value%identityAlignment
A0A1S3CJV8 uncharacterized protein LOC1035012762.4e-1561.64Show/hide
Query:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS
        ML+  G L+ T  V+VEE+VAI LHI+AHDVKNKV RR+FA  +ET++RH N VLN VL+LHE+LL+QP+P++
Subjt:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS

A0A5A7SW62 Myb_DNA-bind_3 domain-containing protein1.2e-1460.27Show/hide
Query:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS
        ML+  G L+ T  V+VEE+V IFLHI+AHDVKN+V RRHFA   ET++RH N VLN VL+LHE+LL+QP+ ++
Subjt:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS

A0A5A7TF70 Putative nuclease HARBI16.4e-1663.01Show/hide
Query:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS
        ML+  G L+ T  V+VEE+VAIFLHI+AHD+KN+V RRHFA   ET++RH NAVLN VL+LHE+LL+QP+P++
Subjt:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS

A0A5A7U6W3 Putative nuclease HARBI12.2e-1664.38Show/hide
Query:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS
        ML+  G L+ T  V+VEE+VAIFLHI+AHDVKN+V RRHFA   ET++RH NAVLN VL+LHE+LL+QP+P++
Subjt:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS

A0A5D3DTL0 Myb_DNA-bind_3 domain-containing protein1.2e-1460.27Show/hide
Query:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS
        ML+  G L+ T  V+VEE+V IFLHI+AHDVKN+V RRHFA   ET++RH N VLN VL+LHE+LL+QP+ ++
Subjt:  MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRH-NAVLNFVLQLHELLLRQPEPIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAAAGCAATTGGGAAATTAAAAGGCACTACAAATGTAGAAGTTGAAGAGATTGTTGCAATATTTTTACACATCCTTGCACATGATGTAAAAAATAAAGTTATACG
TCGACATTTTGCAGGTTTAGAAGAAACAATTAATAGACATAATGCAGTTCTTAACTTTGTGTTACAGTTACATGAGTTATTACTTAGACAACCTGAGCCAATTTCTGCCA
AC
mRNA sequenceShow/hide mRNA sequence
ATGCTTAAAGCAATTGGGAAATTAAAAGGCACTACAAATGTAGAAGTTGAAGAGATTGTTGCAATATTTTTACACATCCTTGCACATGATGTAAAAAATAAAGTTATACG
TCGACATTTTGCAGGTTTAGAAGAAACAATTAATAGACATAATGCAGTTCTTAACTTTGTGTTACAGTTACATGAGTTATTACTTAGACAACCTGAGCCAATTTCTGCCA
AC
Protein sequenceShow/hide protein sequence
MLKAIGKLKGTTNVEVEEIVAIFLHILAHDVKNKVIRRHFAGLEETINRHNAVLNFVLQLHELLLRQPEPISAN