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MS016097 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016097
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCellulose synthase
Genome locationscaffold9_2:346846..348172
RNA-Seq ExpressionMS016097
SyntenyMS016097
Gene Ontology termsGO:0009833 - plant-type primary cell wall biogenesis (biological process)
GO:0030244 - cellulose biosynthetic process (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016759 - cellulose synthase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606879.1 hypothetical protein SDJN03_00221, partial [Cucurbita argyrosperma subsp. sororia]3.5e-4582.64Show/hide
Query:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
        LRRLEEIRGCGKSPKSSC STPSSGTLTSDY TSSVDLSPK+LEKHCRPI++V+KVTE++GSLV+RMDNIEDRVLKLCLQ+EGEIERE+E +MV EK+K 
Subjt:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK

Query:  NKPKKSFKQLVQRCMTGQGTR
         KPKKSFKQL+Q C TGQG R
Subjt:  NKPKKSFKQLVQRCMTGQGTR
XP_004151057.1 uncharacterized protein LOC101205386 [Cucumis sativus]3.8e-4780.99Show/hide
Query:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
        LRRLEEIRGCGKSPKSSC STPSSGTLTSDYHTSSVDLSPKSLEKHCRPI++V+KV E+KGSLV+RMDN+EDRVLKLC+Q+EG++ERE++ +MV +K + 
Subjt:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK

Query:  NKPKKSFKQLVQRCMTGQGTR
         KPK+SFKQLVQRCMTGQGTR
Subjt:  NKPKKSFKQLVQRCMTGQGTR
XP_008461800.1 PREDICTED: uncharacterized protein LOC103500315 [Cucumis melo]2.4e-4680.83Show/hide
Query:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
        LRRLEEI+GC KSPKSSC STPSSGTLTSDYHTSSVDLSPKSLEKHCRPI++V++V E+KGSLV+RMDN+EDRVLKLC+Q+EGE+ERE++ +MV +K KK
Subjt:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK

Query:  NKPKKSFKQLVQRCMTGQGT
         KPKKSFKQLVQ+CMTGQGT
Subjt:  NKPKKSFKQLVQRCMTGQGT
XP_022152667.1 uncharacterized protein LOC111020329 [Momordica charantia]5.6e-5997.6Show/hide
Query:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
        LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIK+TEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
Subjt:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK

Query:  NKPKKSFKQLVQRCMTGQGTRDQLT
         KPKKSFKQLVQRCMTGQG RDQLT
Subjt:  NKPKKSFKQLVQRCMTGQGTRDQLT
XP_038905600.1 uncharacterized protein LOC120091575 [Benincasa hispida]6.4e-4785.12Show/hide
Query:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
        LRRLEEIRGCGKSPKSSC STPSSGTLTSDYHTSSVDLSPK LEKHCRPI++VIKV E+KGSLV+RMDN+EDRVLKLC+Q+EGEIERERE +M+ EKNKK
Subjt:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK

Query:  NKPKKSFKQLVQRCMTGQGTR
        +  KKSFKQLVQ+CMTGQGTR
Subjt:  NKPKKSFKQLVQRCMTGQGTR
TrEMBL top hitse value%identityAlignment
A0A0A0LCD9 Uncharacterized protein1.8e-4780.99Show/hide
Query:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
        LRRLEEIRGCGKSPKSSC STPSSGTLTSDYHTSSVDLSPKSLEKHCRPI++V+KV E+KGSLV+RMDN+EDRVLKLC+Q+EG++ERE++ +MV +K + 
Subjt:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK

Query:  NKPKKSFKQLVQRCMTGQGTR
         KPK+SFKQLVQRCMTGQGTR
Subjt:  NKPKKSFKQLVQRCMTGQGTR
A0A1S3CFF4 uncharacterized protein LOC1035003151.2e-4680.83Show/hide
Query:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
        LRRLEEI+GC KSPKSSC STPSSGTLTSDYHTSSVDLSPKSLEKHCRPI++V++V E+KGSLV+RMDN+EDRVLKLC+Q+EGE+ERE++ +MV +K KK
Subjt:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK

Query:  NKPKKSFKQLVQRCMTGQGT
         KPKKSFKQLVQ+CMTGQGT
Subjt:  NKPKKSFKQLVQRCMTGQGT
A0A5A7U299 Uncharacterized protein1.2e-4680.83Show/hide
Query:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
        LRRLEEI+GC KSPKSSC STPSSGTLTSDYHTSSVDLSPKSLEKHCRPI++V++V E+KGSLV+RMDN+EDRVLKLC+Q+EGE+ERE++ +MV +K KK
Subjt:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK

Query:  NKPKKSFKQLVQRCMTGQGT
         KPKKSFKQLVQ+CMTGQGT
Subjt:  NKPKKSFKQLVQRCMTGQGT
A0A6J1DGX0 uncharacterized protein LOC1110203292.7e-5997.6Show/hide
Query:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
        LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIK+TEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
Subjt:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK

Query:  NKPKKSFKQLVQRCMTGQGTRDQLT
         KPKKSFKQLVQRCMTGQG RDQLT
Subjt:  NKPKKSFKQLVQRCMTGQGTRDQLT
A0A6J1KAC7 uncharacterized protein LOC1114931156.5e-4584.03Show/hide
Query:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK
        LRRLEEIRGCGKSPKSSC STPSSGTLTSDY TSSVDLSPK+LEKHCRPI++V+KVTE++GSLV+RMDNIEDRVLKLCLQ EGEIE+E+E +MV EK+K 
Subjt:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKK

Query:  NKPKKSFKQLVQRCMTGQG
         KPKKSFKQLVQ CMTGQG
Subjt:  NKPKKSFKQLVQRCMTGQG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07985.1 Expressed protein2.1e-1647.41Show/hide
Query:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDL-SPKSLEK-HCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKN
        +R+LEE++  G SP+SS  STPSSGT       SS+DL SP+S+ K HCR +  V + TE KG+L++R++N+E++VLKLC Q E E+E ER+    ++K 
Subjt:  LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDL-SPKSLEK-HCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKN

Query:  KKN-KPKKSFKQLVQR
        KK  K KK  ++LV +
Subjt:  KKN-KPKKSFKQLVQR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAGGCGGTTGGAGGAAATTAGAGGGTGCGGAAAGTCTCCGAAAAGCTCGTGTGGGTCCACTCCATCAAGTGGGACCCTTACGAGCGATTACCACACCTCGTCCGTTGA
TCTGTCGCCCAAGAGCCTGGAGAAGCACTGCCGTCCGATCAGCAACGTCATCAAAGTCACCGAAGTCAAAGGAAGCCTCGTCCAGAGAATGGATAACATAGAGGATCGAG
TCCTCAAGCTTTGTTTGCAACTAGAGGGAGAGATAGAGAGGGAGAGAGAGACGTTGATGGTTTCAGAGAAGAATAAGAAGAACAAACCTAAGAAGAGCTTTAAGCAACTT
GTTCAACGGTGTATGACGGGACAAGGAACACGTGATCAGTTAACG
mRNA sequenceShow/hide mRNA sequence
TTGAGGCGGTTGGAGGAAATTAGAGGGTGCGGAAAGTCTCCGAAAAGCTCGTGTGGGTCCACTCCATCAAGTGGGACCCTTACGAGCGATTACCACACCTCGTCCGTTGA
TCTGTCGCCCAAGAGCCTGGAGAAGCACTGCCGTCCGATCAGCAACGTCATCAAAGTCACCGAAGTCAAAGGAAGCCTCGTCCAGAGAATGGATAACATAGAGGATCGAG
TCCTCAAGCTTTGTTTGCAACTAGAGGGAGAGATAGAGAGGGAGAGAGAGACGTTGATGGTTTCAGAGAAGAATAAGAAGAACAAACCTAAGAAGAGCTTTAAGCAACTT
GTTCAACGGTGTATGACGGGACAAGGAACACGTGATCAGTTAACG
Protein sequenceShow/hide protein sequence
LRRLEEIRGCGKSPKSSCGSTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISNVIKVTEVKGSLVQRMDNIEDRVLKLCLQLEGEIERERETLMVSEKNKKNKPKKSFKQL
VQRCMTGQGTRDQLT