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MS016101 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016101
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor MYB46-like
Genome locationscaffold9_2:392001..392525
RNA-Seq ExpressionMS016101
SyntenyMS016101
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149614.1 transcription factor MYB46 [Cucumis sativus]7.5e-7081.01Show/hide
Query:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---MAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS
        MMFGG+M+MQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD  +MPFLDN+FE   MAG  NGFLQAP   L E+GMGM   MEERF YGSLEAQRS
Subjt:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---MAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS

Query:  MEMERDVACLPHEEMNY-PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL
        ME+ER+V C+PHEEMN+ PLMN+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI SFPHFL
Subjt:  MEMERDVACLPHEEMNY-PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL

XP_008461794.1 PREDICTED: transcription factor MYB46-like [Cucumis melo]2.2e-6981.67Show/hide
Query:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---MAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS
        MMFGG+MSMQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD  +MPFLDN+FE   MAG  NGFLQAP   L E+GMG  MRMEERF YGSLEAQRS
Subjt:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---MAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS

Query:  MEMERDVACLPHEEMNY-PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDI-PSFPHFL
        ME+ER+V C+PHEEMN+ PLMN+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI  SFPHFL
Subjt:  MEMERDVACLPHEEMNY-PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDI-PSFPHFL

XP_022152697.1 transcription factor MYB83-like, partial [Momordica charantia]1.1e-8998.29Show/hide
Query:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEM
        MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE+AGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEM
Subjt:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEM

Query:  ERDVACLPHEEMNYPLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL
        ERDVACLPHEEMN PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFP+FL
Subjt:  ERDVACLPHEEMNYPLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL

XP_023525825.1 transcription factor MYB46-like [Cucurbita pepo subsp. pepo]3.2e-6879.21Show/hide
Query:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMA---GAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS
        MMFGG+M+MQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD  ++PFLDNNFEMA   GA NGFLQAPGG   E  MGM M MEER SYGSLEAQRS
Subjt:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMA---GAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS

Query:  MEMERDVACLPHEEMNYPLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL
        ME+ER+V CLPHEE     MN+R NFD+YLGTN+QNLNVEE+FGDMGSHGQ+QESLKMGNEWD+ESFMQDI SFPHFL
Subjt:  MEMERDVACLPHEEMNYPLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL

XP_038905632.1 transcription factor MYB46-like [Benincasa hispida]8.3e-6981.11Show/hide
Query:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEM---AGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS
        MMFGG+M+MQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD  +MPFLDNNFEM   AGA NGFLQ P      +GMGM MRMEERFSYG+LE QRS
Subjt:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEM---AGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS

Query:  MEMERDVACLPHEE-MNYPLM-NSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL
        ME+ER+V CLPHEE MN PLM N+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI SFPHFL
Subjt:  MEMERDVACLPHEE-MNYPLM-NSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL

TrEMBL top hitse value%identityAlignment
A0A0A0L9U4 Uncharacterized protein3.7e-7081.01Show/hide
Query:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---MAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS
        MMFGG+M+MQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD  +MPFLDN+FE   MAG  NGFLQAP   L E+GMGM   MEERF YGSLEAQRS
Subjt:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---MAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS

Query:  MEMERDVACLPHEEMNY-PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL
        ME+ER+V C+PHEEMN+ PLMN+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI SFPHFL
Subjt:  MEMERDVACLPHEEMNY-PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL

A0A1S3CFJ0 transcription factor MYB46-like1.1e-6981.67Show/hide
Query:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---MAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS
        MMFGG+MSMQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD  +MPFLDN+FE   MAG  NGFLQAP   L E+GMG  MRMEERF YGSLEAQRS
Subjt:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---MAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS

Query:  MEMERDVACLPHEEMNY-PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDI-PSFPHFL
        ME+ER+V C+PHEEMN+ PLMN+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI  SFPHFL
Subjt:  MEMERDVACLPHEEMNY-PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDI-PSFPHFL

A0A5D3BPM7 Transcription factor MYB46-like1.1e-6981.67Show/hide
Query:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---MAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS
        MMFGG+MSMQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD  +MPFLDN+FE   MAG  NGFLQAP   L E+GMG  MRMEERF YGSLEAQRS
Subjt:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---MAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS

Query:  MEMERDVACLPHEEMNY-PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDI-PSFPHFL
        ME+ER+V C+PHEEMN+ PLMN+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI  SFPHFL
Subjt:  MEMERDVACLPHEEMNY-PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDI-PSFPHFL

A0A6J1DGZ7 transcription factor MYB83-like5.4e-9098.29Show/hide
Query:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEM
        MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE+AGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEM
Subjt:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEM

Query:  ERDVACLPHEEMNYPLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL
        ERDVACLPHEEMN PLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFP+FL
Subjt:  ERDVACLPHEEMNYPLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL

A0A6J1KCL7 transcription factor MYB46-like2.2e-6778.65Show/hide
Query:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMA---GAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS
        MMFGG+M+MQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNS D  +MPFLDNNFEMA   GA NGFLQAPGG   E  MGM M ME+R SYGSLEAQRS
Subjt:  MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMA---GAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRS

Query:  MEMERDVACLPHEEMNYPLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL
        ME+ER+V CLPHEE     MN+R NFD+YLGTNEQNLN+EE+FGDM SHGQ+QESLKMGNEWDLESFMQDI SFPHFL
Subjt:  MEMERDVACLPHEEMNYPLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTTGGAGGTTTAATGTCGATGCAAGAACACGACATCGTGAGCATGAACATGAGCATGGATTCATCGTCCACCTCCTCGTCATCTTCCCAACTTCCAGTGTCCAT
CACAGGACACAACTCCTTCGATGCTCCAACCATGCCTTTCCTAGACAACAACTTCGAAATGGCCGGGGCTGCCAACGGCTTTCTGCAGGCACCGGGAGGGCGCTTGGCAG
AAGTCGGAATGGGAATGGAAATGAGGATGGAAGAGAGATTCAGCTATGGAAGTTTGGAGGCTCAAAGATCAATGGAAATGGAAAGGGATGTGGCATGTCTTCCACATGAA
GAGATGAACTATCCATTAATGAATAGTAGAGGCAATTTTGATCAATATTTGGGAACAAATGAGCAAAATTTGAATGTGGAGGAGATTTTTGGAGACATGGGAAGCCATGG
ACAATTACAAGAAAGCTTGAAGATGGGTAATGAATGGGATTTGGAGAGTTTCATGCAAGACATACCCTCATTCCCTCATTTCCTT
mRNA sequenceShow/hide mRNA sequence
ATGATGTTTGGAGGTTTAATGTCGATGCAAGAACACGACATCGTGAGCATGAACATGAGCATGGATTCATCGTCCACCTCCTCGTCATCTTCCCAACTTCCAGTGTCCAT
CACAGGACACAACTCCTTCGATGCTCCAACCATGCCTTTCCTAGACAACAACTTCGAAATGGCCGGGGCTGCCAACGGCTTTCTGCAGGCACCGGGAGGGCGCTTGGCAG
AAGTCGGAATGGGAATGGAAATGAGGATGGAAGAGAGATTCAGCTATGGAAGTTTGGAGGCTCAAAGATCAATGGAAATGGAAAGGGATGTGGCATGTCTTCCACATGAA
GAGATGAACTATCCATTAATGAATAGTAGAGGCAATTTTGATCAATATTTGGGAACAAATGAGCAAAATTTGAATGTGGAGGAGATTTTTGGAGACATGGGAAGCCATGG
ACAATTACAAGAAAGCTTGAAGATGGGTAATGAATGGGATTTGGAGAGTTTCATGCAAGACATACCCTCATTCCCTCATTTCCTT
Protein sequenceShow/hide protein sequence
MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHE
EMNYPLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL