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MS016107 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016107
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold9_2:431335..431559
RNA-Seq ExpressionMS016107
SyntenyMS016107
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577525.1 hypothetical protein SDJN03_25099, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1566.67Show/hide
Query:  LQVVGGDGEQRSTDERAESWEAGGGAAGRCRCRTLRLTAGHDGADGCGSEEDGAGDFLHLHCDFLGFFL
        L VVG DGEQRS DERA+ W+A  G AG  RCR+ RL   H G DGCGSEEDGAGD LH HCDF   FL
Subjt:  LQVVGGDGEQRSTDERAESWEAGGGAAGRCRCRTLRLTAGHDGADGCGSEEDGAGDFLHLHCDFLGFFL

KAG6581582.1 hypothetical protein SDJN03_21584, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1565.75Show/hide
Query:  VVGGDGEQRSTDERAESWEAGGGAAGRCRCRTLRLTAGHDGADGCGSEEDGAGDFLHLHCDFLGFFLLFLFLF
        VVG D EQRS ++RA+ W+AG G A   RC + RL   HDGADGCGSEEDGAGD LHLHCD LGFF  F+F F
Subjt:  VVGGDGEQRSTDERAESWEAGGGAAGRCRCRTLRLTAGHDGADGCGSEEDGAGDFLHLHCDFLGFFLLFLFLF

KAG6583571.1 hypothetical protein SDJN03_19503, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1264.06Show/hide
Query:  VGGDGEQRSTDERAESWEAGGGAAGRCRCRTLRLTAGHDGADGCGSEEDGAGDFLHLHCDFLGF
        VG DGEQRS DERA+  + GGG+A   RC +  L   +DGADGCGSEE+GAGD LHLHCD+L F
Subjt:  VGGDGEQRSTDERAESWEAGGGAAGRCRCRTLRLTAGHDGADGCGSEEDGAGDFLHLHCDFLGF

KAG6606874.1 Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia]6.9e-1266.15Show/hide
Query:  VVGGDGEQRSTDERAESWEAGGGAAGRCRCRTLRLTAGHDGADGCGSEEDGAGDFLHLHCDFLGF
        V G DGEQRS DERA+  +AGGGAAG  RC +  L   +DGAD CGSEE+GA D LHLHCDFL F
Subjt:  VVGGDGEQRSTDERAESWEAGGGAAGRCRCRTLRLTAGHDGADGCGSEEDGAGDFLHLHCDFLGF

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTACAAGTAGTAGGCGGCGACGGAGAGCAGCGAAGCACCGATGAGAGAGCCGAGAGCTGGGAGGCCGGCGGTGGCGCCGCTGGTCGGTGCAGGTGCCGGACCCTGCGCCT
CACCGCTGGCCACGACGGCGCTGACGGATGCGGCAGCGAAGAGGACGGCGCAGGCGATTTTCTTCATCTCCATTGCGATTTTTTAGGTTTTTTTCTCCTTTTTCTTTTCC
TGTTT
mRNA sequenceShow/hide mRNA sequence
TTACAAGTAGTAGGCGGCGACGGAGAGCAGCGAAGCACCGATGAGAGAGCCGAGAGCTGGGAGGCCGGCGGTGGCGCCGCTGGTCGGTGCAGGTGCCGGACCCTGCGCCT
CACCGCTGGCCACGACGGCGCTGACGGATGCGGCAGCGAAGAGGACGGCGCAGGCGATTTTCTTCATCTCCATTGCGATTTTTTAGGTTTTTTTCTCCTTTTTCTTTTCC
TGTTT
Protein sequenceShow/hide protein sequence
LQVVGGDGEQRSTDERAESWEAGGGAAGRCRCRTLRLTAGHDGADGCGSEEDGAGDFLHLHCDFLGFFLLFLFLF