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MS016111 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016111
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationscaffold9_2:436569..436703
RNA-Seq ExpressionMS016111
SyntenyMS016111
Gene Ontology termsNA
InterPro domainsIPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QVL29573.1 ATP-dependent Clp protease proteolytic subunit 1 [Murraya exotica]5.4e-0489.29Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQTICMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
QWY88563.1 clp protease proteolytic subunit [Lovoa trichilioides]5.4e-0489.29Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQTICMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
YP_009262315.1 clp protease proteolytic subunit [Spondias tuberosa]5.4e-0489.29Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQTICMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
YP_009334032.1 ATP-dependent Clp protease proteolytic subunit [Merrillia caloxylon]5.4e-0489.29Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQTICMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
YP_010145318.1 ClpP [Aralia atropurpurea]5.4e-0489.29Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQTICMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
TrEMBL top hitse value%identityAlignment
A0A1B0VD17 ATP-dependent Clp protease proteolytic subunit2.6e-0489.29Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQTICMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
A0A1P8LE97 ATP-dependent Clp protease proteolytic subunit2.6e-0480.65Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSFYSS
        IAIY TMQF RPDVQT+CMGLA SMGSF  S
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSFYSS
A0A6B9QEG4 ATP-dependent Clp protease proteolytic subunit2.6e-0489.29Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQTICMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
A0A7M1Y7P8 ATP-dependent Clp protease proteolytic subunit2.6e-0489.29Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQTICMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
A0A7T3P7A1 ATP-dependent Clp protease2.6e-0489.29Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQTICMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
SwissProt top hitse value%identityAlignment
A4GYT6 ATP-dependent Clp protease proteolytic subunit9.2e-0785.71Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQT+CMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
Q09MF2 ATP-dependent Clp protease proteolytic subunit7.1e-0789.29Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQTICMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
Q0G9T7 ATP-dependent Clp protease proteolytic subunit9.2e-0785.71Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        +AIY TMQF RPDVQTICMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
Q14FD2 ATP-dependent Clp protease proteolytic subunit9.2e-0785.71Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        IAIY TMQF RPDVQT+CMGLA SMGSF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF
Q472D3 ATP-dependent Clp protease proteolytic subunit3.5e-0654.55Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSFY--SSQRSKNSSRPNA
        +AIY TMQF +PDVQT+CMG+A SMG+F   +  + K S+ PN+
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSFY--SSQRSKNSSRPNA
Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 58.9e-0550Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSFYSS--QRSKNSSRPNA
        +AI+ TM+  RPDV T+C+GLA SMG+F  S   + K  S PN+
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSFYSS--QRSKNSSRPNA
ATCG00670.1 plastid-encoded CLP P1.6e-0678.57Show/hide
Query:  IAIYSTMQFERPDVQTICMGLATSMGSF
        +AIY TMQF RPDVQTICMGLA S+ SF
Subjt:  IAIYSTMQFERPDVQTICMGLATSMGSF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAGCTATTTATAGTACTATGCAATTTGAGCGACCAGATGTACAGACAATATGCATGGGATTAGCCACTTCAATGGGATCTTTTTATTCGAGTCAGAGAAGCAAGAACAG
TTCAAGGCCAAATGCAGCGCAGATT
mRNA sequenceShow/hide mRNA sequence
ATAGCTATTTATAGTACTATGCAATTTGAGCGACCAGATGTACAGACAATATGCATGGGATTAGCCACTTCAATGGGATCTTTTTATTCGAGTCAGAGAAGCAAGAACAG
TTCAAGGCCAAATGCAGCGCAGATT
Protein sequenceShow/hide protein sequence
IAIYSTMQFERPDVQTICMGLATSMGSFYSSQRSKNSSRPNAAQI