; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016118 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016118
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRas-related protein
Genome locationscaffold9_2:483882..485938
RNA-Seq ExpressionMS016118
SyntenyMS016118
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461787.1 PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo]1.4e-10892.34Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTL IDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPT+DA+EFAQMENLFFMETSALEATNVE AFNTILTEIY+VIS+KALVAN++ DSGG+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCCRS
        KGTKIVVPGQE  AASSGCCRS
Subjt:  KGTKIVVPGQERSAASSGCCRS

XP_022152719.1 ras-related protein RABA4d-like [Momordica charantia]8.0e-117100Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCCRS
        KGTKIVVPGQERSAASSGCCRS
Subjt:  KGTKIVVPGQERSAASSGCCRS

XP_022949337.1 ras-related protein RABA4c-like [Cucurbita moschata]8.0e-10991.89Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        Q+FDHIARWLEELR HADKNIVIMLIGNKSDLGSLRVVPT+DA+EFAQMENLFFMETSALEATNVE AFNTILTEIY+VISRKAL+ANE+ DSGGNSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCCRS
        KGTKIVVPGQE  +A+SGCCRS
Subjt:  KGTKIVVPGQERSAASSGCCRS

XP_022998498.1 ras-related protein RABA4c-like [Cucurbita maxima]1.5e-10790.99Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        Q+FDHI RWLEELR HADKNIVIMLIGNKSDLGSLRVVPT+DA+EFAQMENLFFMETSALEATNVE AFNTILTEIY+VISRKAL+ANE+ DSGG+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCCRS
        KGTKIVVPGQE   A+SGCCRS
Subjt:  KGTKIVVPGQERSAASSGCCRS

XP_023525670.1 ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]6.8e-10890.99Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        Q+FDHIARWLEELR HADKNIVIMLIGNKSDLGSLRVVPT+DA+EF+QMENLFFMETSALEATNVE AFNTILTEIY+VISRKAL+ANE+ DSGG+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCCRS
        KGTKIVVPGQE  +A+SGCCRS
Subjt:  KGTKIVVPGQERSAASSGCCRS

TrEMBL top hitse value%identityAlignment
A0A0A0LEW7 Uncharacterized protein1.6e-10790.99Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTL IDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        Q+FDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPT+DA+EFAQMENL FMETSALEATNVE AFNTILTEIY+VIS+KAL+AN++ DSGG+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCCRS
        KGTKIVVPGQE  AASSGCCRS
Subjt:  KGTKIVVPGQERSAASSGCCRS

A0A1S3CFD0 ras-related protein RABA4c isoform X16.6e-10992.34Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTL IDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPT+DA+EFAQMENLFFMETSALEATNVE AFNTILTEIY+VIS+KALVAN++ DSGG+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCCRS
        KGTKIVVPGQE  AASSGCCRS
Subjt:  KGTKIVVPGQERSAASSGCCRS

A0A6J1DGV8 ras-related protein RABA4d-like3.9e-117100Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCCRS
        KGTKIVVPGQERSAASSGCCRS
Subjt:  KGTKIVVPGQERSAASSGCCRS

A0A6J1GBR1 ras-related protein RABA4c-like3.9e-10991.89Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        Q+FDHIARWLEELR HADKNIVIMLIGNKSDLGSLRVVPT+DA+EFAQMENLFFMETSALEATNVE AFNTILTEIY+VISRKAL+ANE+ DSGGNSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCCRS
        KGTKIVVPGQE  +A+SGCCRS
Subjt:  KGTKIVVPGQERSAASSGCCRS

A0A6J1KGX4 ras-related protein RABA4c-like7.3e-10890.99Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        Q+FDHI RWLEELR HADKNIVIMLIGNKSDLGSLRVVPT+DA+EFAQMENLFFMETSALEATNVE AFNTILTEIY+VISRKAL+ANE+ DSGG+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCCRS
        KGTKIVVPGQE   A+SGCCRS
Subjt:  KGTKIVVPGQERSAASSGCCRS

SwissProt top hitse value%identityAlignment
P25766 Ras-related protein RGP12.5e-9783.18Show/hide
Query:  QKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARW
        QKIDYVFKVVLIGDSAVGKSQLLARF+RNEF+LDSKATIGVEFQT+TL ID +T+KAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+TKRQSFDH+ARW
Subjt:  QKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARW

Query:  LEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVVPG
        LEELRGHADKNIVIMLIGNKSDLG+LRVVPT+DA+EFA+ ENLFFMETSALE+TNVE AF T+LTEIY+++S+K LVANE+ DS GNSSLLKGTKIVVPG
Subjt:  LEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVVPG

Query:  QERS-AASSGCCRS
        QE +    + CC S
Subjt:  QERS-AASSGCCRS

Q40191 Ras-related protein Rab11A5.8e-8674.07Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR
        N KIDYVFKVVLIGDSAVGKSQ+LARF+RNEFSLDSK+TIGVEFQT+TLVID KT+KAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+TKRQ+FDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR

Query:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVVP
        WLEELR HADKNIVI+LIGNK DL + R VPT+DA+EFA+ E LFF+ETSALEATNVE+AF T+LTEIY ++++K+L A+E +   GNS+ L G KI++P
Subjt:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVVP

Query:  G--QERSAASSGCCRS
        G  QE  A  + CC++
Subjt:  G--QERSAASSGCCRS

Q9FE79 Ras-related protein RABA4c2.7e-9980.91Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MS   SNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFS++SKATIGVEFQT+TL ID+KTIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+TKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        QSFDH+ARWLEELRGHADKNIVIMLIGNK+DLG+LR VPT+DA+EFAQ ENLFFMETSAL++ NVE +F T+LTEIY+++S+K LVANE+ +SGG+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCC
        +GTKIVV G+E  +   GCC
Subjt:  KGTKIVVPGQERSAASSGCC

Q9FJN8 Ras-related protein RABA4a1.7e-8270.97Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR
        +QKIDYVFKVVLIGDSAVGKSQ+LAR++R+EFSLDSKATIGVEFQT+TLVID K++KAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+T+RQ+FDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR

Query:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVV-
        WLEELR HADKNIVI+LIGNKSDL   R +PT+DA+EFA+ E LFF+ETSA  ATNVE+AF+T+LTEI+ ++++K+L A+ED ++ GN   L G KI + 
Subjt:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVV-

Query:  --PGQERSAASSGCCRS
          PGQ     S+ CC S
Subjt:  --PGQERSAASSGCCRS

Q9LH50 Ras-related protein RABA4d9.2e-10082.27Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFS+DSKATIGVEFQTKTLVID KT+KAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        QSFDH+A+WLEELRGHADKNIVIMLIGNK DLGSLR VPT+DA+EFAQ ENLFFMETSALEATNVETAF TILTEIY++IS+K+L A++D D+ GNSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCC
        KGT+I++P ++ S    GCC
Subjt:  KGTKIVVPGQERSAASSGCC

Arabidopsis top hitse value%identityAlignment
AT1G16920.1 RAB GTPase homolog A1B3.2e-7162.02Show/hide
Query:  DYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWLEE
        DY+FKVVLIGDS VGKS LL+RF++NEF+L+SK+TIGVEF T+TL +D K +KAQIWDTAGQERYRA+TSAYYRGAVGA+L+YD+T+R +F+++ RWL+E
Subjt:  DYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWLEE

Query:  LRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVVPGQER
        L+ H D NIV+ML+GNKSDL  L  VPT+D + +A+ E+L FMETSALEATNVE AF  +LT+IY++ S+K + A ED    GN+S+ KG KI V     
Subjt:  LRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVVPGQER

Query:  SAASSGCC
        +    GCC
Subjt:  SAASSGCC

AT3G12160.1 RAB GTPase homolog A4D6.6e-10182.27Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLLARF+RNEFS+DSKATIGVEFQTKTLVID KT+KAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        QSFDH+A+WLEELRGHADKNIVIMLIGNK DLGSLR VPT+DA+EFAQ ENLFFMETSALEATNVETAF TILTEIY++IS+K+L A++D D+ GNSSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCC
        KGT+I++P ++ S    GCC
Subjt:  KGTKIVVPGQERSAASSGCC

AT4G39990.1 RAB GTPase homolog A4B6.2e-8371.5Show/hide
Query:  KIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWL
        K+DYVFKVVLIGDSAVGKSQLLARF+R+EFS+DSKATIGVEFQT+TL I+QK+IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR++F+HI RWL
Subjt:  KIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWL

Query:  EELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVVP--
        EELR HADKNIVI+LIGNKSDL   R VPT+DA+EFA+ E LFF+ETSAL ATNVE +FNT++T+IY  +++K L +  D+++ G+   L G KI++P  
Subjt:  EELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVVP--

Query:  GQERSAASSGCCRS
        GQE  A +S CC S
Subjt:  GQERSAASSGCCRS

AT5G47960.1 RAB GTPase homolog A4C1.9e-10080.91Show/hide
Query:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR
        MS   SNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFS++SKATIGVEFQT+TL ID+KTIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+TKR
Subjt:  MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL
        QSFDH+ARWLEELRGHADKNIVIMLIGNK+DLG+LR VPT+DA+EFAQ ENLFFMETSAL++ NVE +F T+LTEIY+++S+K LVANE+ +SGG+SSLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLL

Query:  KGTKIVVPGQERSAASSGCC
        +GTKIVV G+E  +   GCC
Subjt:  KGTKIVVPGQERSAASSGCC

AT5G65270.1 RAB GTPase homolog A4A1.2e-8370.97Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR
        +QKIDYVFKVVLIGDSAVGKSQ+LAR++R+EFSLDSKATIGVEFQT+TLVID K++KAQIWDTAGQERYRAVTSAYYRGAVGAML+YD+T+RQ+FDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIAR

Query:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVV-
        WLEELR HADKNIVI+LIGNKSDL   R +PT+DA+EFA+ E LFF+ETSA  ATNVE+AF+T+LTEI+ ++++K+L A+ED ++ GN   L G KI + 
Subjt:  WLEELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVV-

Query:  --PGQERSAASSGCCRS
          PGQ     S+ CC S
Subjt:  --PGQERSAASSGCCRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAATTTGAACTCCAATTTCAATCAGAAGATTGATTATGTATTCAAGGTCGTGTTGATCGGAGATTCTGCGGTGGGGAAATCGCAACTCCTTGCCCGTTTTTCCAG
GAATGAGTTCAGTTTGGATTCGAAGGCGACCATTGGGGTTGAGTTTCAGACCAAGACGCTTGTCATCGACCAGAAAACTATCAAGGCACAGATATGGGATACTGCTGGGC
AGGAGAGGTATCGTGCAGTGACGAGTGCATACTACCGAGGTGCCGTAGGGGCAATGCTGATCTACGACATGACAAAGCGTCAGTCCTTCGATCATATAGCTAGGTGGTTA
GAGGAACTCCGTGGTCATGCAGACAAAAACATTGTCATCATGCTCATAGGGAACAAGTCCGACCTGGGTTCTCTCCGTGTCGTTCCCACAGACGATGCGAGAGAGTTTGC
TCAAATGGAGAATCTGTTTTTCATGGAAACATCAGCGCTCGAGGCCACAAATGTAGAGACAGCGTTTAATACCATCCTGACGGAAATTTATCAAGTGATTAGCAGGAAGG
CTCTGGTTGCAAACGAGGACGCCGATTCCGGAGGAAACTCGTCACTTCTTAAAGGAACAAAGATTGTTGTACCGGGACAAGAGCGGTCGGCAGCAAGCTCTGGGTGTTGC
AGAAGT
mRNA sequenceShow/hide mRNA sequence
ATGTCTAATTTGAACTCCAATTTCAATCAGAAGATTGATTATGTATTCAAGGTCGTGTTGATCGGAGATTCTGCGGTGGGGAAATCGCAACTCCTTGCCCGTTTTTCCAG
GAATGAGTTCAGTTTGGATTCGAAGGCGACCATTGGGGTTGAGTTTCAGACCAAGACGCTTGTCATCGACCAGAAAACTATCAAGGCACAGATATGGGATACTGCTGGGC
AGGAGAGGTATCGTGCAGTGACGAGTGCATACTACCGAGGTGCCGTAGGGGCAATGCTGATCTACGACATGACAAAGCGTCAGTCCTTCGATCATATAGCTAGGTGGTTA
GAGGAACTCCGTGGTCATGCAGACAAAAACATTGTCATCATGCTCATAGGGAACAAGTCCGACCTGGGTTCTCTCCGTGTCGTTCCCACAGACGATGCGAGAGAGTTTGC
TCAAATGGAGAATCTGTTTTTCATGGAAACATCAGCGCTCGAGGCCACAAATGTAGAGACAGCGTTTAATACCATCCTGACGGAAATTTATCAAGTGATTAGCAGGAAGG
CTCTGGTTGCAAACGAGGACGCCGATTCCGGAGGAAACTCGTCACTTCTTAAAGGAACAAAGATTGTTGTACCGGGACAAGAGCGGTCGGCAGCAAGCTCTGGGTGTTGC
AGAAGT
Protein sequenceShow/hide protein sequence
MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWL
EELRGHADKNIVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVISRKALVANEDADSGGNSSLLKGTKIVVPGQERSAASSGCC
RS