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MS016123 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016123
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-directed RNA polymerase subunit beta'
Genome locationscaffold9_2:527920..528000
RNA-Seq ExpressionMS016123
SyntenyMS016123
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
Q09X26 DNA-directed RNA polymerase subunit beta'1.4e-0581.48Show/hide
Query:  LRSLIRQHFTSNIGVAKIKIREKEPIV
        +R LIRQHF SNIGVAK KIREKEP+V
Subjt:  LRSLIRQHFTSNIGVAKIKIREKEPIV
Q4VZP2 DNA-directed RNA polymerase subunit beta'1.0e-0585.19Show/hide
Query:  LRSLIRQHFTSNIGVAKIKIREKEPIV
        +R LIRQHF SNIGVAK KIREKEPIV
Subjt:  LRSLIRQHFTSNIGVAKIKIREKEPIV
Q8HVY4 DNA-directed RNA polymerase subunit beta'4.0e-0577.78Show/hide
Query:  LRSLIRQHFTSNIGVAKIKIREKEPIV
        +R LIR+HF SNIG+AK KIREKEPIV
Subjt:  LRSLIRQHFTSNIGVAKIKIREKEPIV
Q8S8Y0 DNA-directed RNA polymerase subunit beta'5.2e-0581.48Show/hide
Query:  LRSLIRQHFTSNIGVAKIKIREKEPIV
        +R LIRQH  SNIGVAK KIREKEPIV
Subjt:  LRSLIRQHFTSNIGVAKIKIREKEPIV
Q9BBS8 DNA-directed RNA polymerase subunit beta'1.0e-0585.19Show/hide
Query:  LRSLIRQHFTSNIGVAKIKIREKEPIV
        +RSLIR+HF SNIGVAK KIREKEPIV
Subjt:  LRSLIRQHFTSNIGVAKIKIREKEPIV
Arabidopsis top hitse value%identityAlignment
ATCG00180.1 DNA-directed RNA polymerase family protein3.1e-0574.07Show/hide
Query:  LRSLIRQHFTSNIGVAKIKIREKEPIV
        +R LIRQH  SNIGVAK +IREK+PIV
Subjt:  LRSLIRQHFTSNIGVAKIKIREKEPIV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTACGTAGTCTAATTCGACAACATTTTACTTCAAACATAGGAGTTGCTAAAATTAAAATTCGGGAAAAAGAACCTATTGTA
mRNA sequenceShow/hide mRNA sequence
TTACGTAGTCTAATTCGACAACATTTTACTTCAAACATAGGAGTTGCTAAAATTAAAATTCGGGAAAAAGAACCTATTGTA
Protein sequenceShow/hide protein sequence
LRSLIRQHFTSNIGVAKIKIREKEPIV