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MS016139 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016139
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane 9 superfamily member
Genome locationscaffold9_2:619353..619637
RNA-Seq ExpressionMS016139
SyntenyMS016139
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581607.1 hypothetical protein SDJN03_21609, partial [Cucurbita argyrosperma subsp. sororia]9.6e-2778.26Show/hide
Query:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDDA
        M+ ILE D   +F+KIAMFVFVQ+LVYLILSKSSN+FS D+KLRSLSFKPARSVSIRR LAALSDLPPGGELSPS    TPSS RR+RSDD+
Subjt:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDDA

KAG6606858.1 hypothetical protein SDJN03_00200, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2777.66Show/hide
Query:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDDAGR
        MMPILEIDAG+ FVKIAMF+ VQLLVY ILS+SS++FSKDQKL+SLSFKPARSVSIRRFLAALSD+P GGELSPS +  TPS   R+ SDD GR
Subjt:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDDAGR

KAG7018107.1 hypothetical protein SDJN02_19975, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-2878.72Show/hide
Query:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDDAGR
        M+ ILE D   +F+KIAMFVFVQ+LVYLILSKSSN+FS D+KLRSLSFKPARSVSIRR LAALSDLPPGGELSPS    TPSS RR+RSDD+GR
Subjt:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDDAGR

XP_011651805.2 uncharacterized protein LOC105434941 [Cucumis sativus]9.9e-3284.04Show/hide
Query:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDDAGR
        M PI + DAG++FV+IAMFVF+QLLVYLILSKSSN+FS DQK+RSLSFKPARSVSIRRFLAALSDLPPGGELSPS K  TPSSARRDRSDD GR
Subjt:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDDAGR

XP_038905322.1 uncharacterized protein LOC120091388 [Benincasa hispida]5.4e-3081.91Show/hide
Query:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDDAGR
        M PILE D  ++FVKIAMF FVQLLVYLILSKSSN+FS DQKLRSLSFKPARSVSIRRFLAALSDLPPGGE+SP+P+  TPSS RRD SDD GR
Subjt:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDDAGR

TrEMBL top hitse value%identityAlignment
A0A1S3CFW1 uncharacterized protein LOC1035002811.0e-2681.32Show/hide
Query:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDD
        M PI E DAG++FV+IAMFVFVQLLVYLILSKSSN+FS DQKLRSLSFKPARSVSIRRFLAALSDLPPGGELS       PSS RR RSDD
Subjt:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDD

A0A218WLF6 uncharacterized protein LOC1161988351.6e-1665.82Show/hide
Query:  GDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPK-PPTPSSARRD
        GDV +K+ MFV VQ LVYLILSKSS++FSKD+  +SLSF+P RSVSIRRF+AALSD+P GGE SPSP+ PP+ ++   D
Subjt:  GDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPK-PPTPSSARRD

A0A438IA56 Uncharacterized protein8.2e-1669.74Show/hide
Query:  EIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTP
        E    D+ +K+ MFV VQ LVYLILSKSSN+FSK+ K RS  FKPARSVSIRR LA L+DLPPGGELSPSP P  P
Subjt:  EIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTP

A0A5A7UC63 Uncharacterized protein1.0e-2681.32Show/hide
Query:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDD
        M PI E DAG++FV+IAMFVFVQLLVYLILSKSSN+FS DQKLRSLSFKPARSVSIRRFLAALSDLPPGGELS       PSS RR RSDD
Subjt:  MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDD

B9REM2 Uncharacterized protein1.6e-1670.51Show/hide
Query:  MPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPP
        M I+E   GD+ +K+AMF  VQ LVY+ILSKSSN+FS   K RS SFKPARSVSIRRFLAAL DLP  GELSPSPK P
Subjt:  MPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05575.1 unknown protein2.1e-1148.75Show/hide
Query:  VFVKIAMFVFVQLLVYLILSKSSNMFSKDQKL-RSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSD
        + +K+++F  +Q LVYLILSKSS++FS  + + R+ SF+ ARS+SIRR LA L D+P GGE+SPS   P+ +S+    S+
Subjt:  VFVKIAMFVFVQLLVYLILSKSSNMFSKDQKL-RSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSD

AT2G31945.1 unknown protein5.4e-1253.33Show/hide
Query:  GDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKL-RSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSS
        G + +K+A+F  VQ LVYLIL KSS +F++   L R+ SF+P RSVSIRR LAAL D+P G ++SPS    + SS
Subjt:  GDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKL-RSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCCGATTTTGGAAATCGACGCCGGCGATGTGTTCGTCAAAATCGCCATGTTCGTCTTCGTTCAGCTTCTGGTGTATCTGATCCTCTCCAAATCCTCAAATATGTT
CTCCAAGGACCAGAAATTGAGATCTCTCAGCTTCAAGCCCGCTCGATCCGTCAGTATTCGCCGCTTTCTCGCCGCGCTTTCCGATTTGCCTCCCGGCGGCGAGCTCTCTC
CGTCGCCCAAACCTCCGACGCCGTCCTCCGCTCGCCGGGATCGATCCGACGACGCCGGCAGATCT
mRNA sequenceShow/hide mRNA sequence
ATGATGCCGATTTTGGAAATCGACGCCGGCGATGTGTTCGTCAAAATCGCCATGTTCGTCTTCGTTCAGCTTCTGGTGTATCTGATCCTCTCCAAATCCTCAAATATGTT
CTCCAAGGACCAGAAATTGAGATCTCTCAGCTTCAAGCCCGCTCGATCCGTCAGTATTCGCCGCTTTCTCGCCGCGCTTTCCGATTTGCCTCCCGGCGGCGAGCTCTCTC
CGTCGCCCAAACCTCCGACGCCGTCCTCCGCTCGCCGGGATCGATCCGACGACGCCGGCAGATCT
Protein sequenceShow/hide protein sequence
MMPILEIDAGDVFVKIAMFVFVQLLVYLILSKSSNMFSKDQKLRSLSFKPARSVSIRRFLAALSDLPPGGELSPSPKPPTPSSARRDRSDDAGRS