; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016144 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016144
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationscaffold9_2:675245..675691
RNA-Seq ExpressionMS016144
SyntenyMS016144
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026961 - PGG domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581828.1 hypothetical protein SDJN03_21830, partial [Cucurbita argyrosperma subsp. sororia]9.7e-4260.65Show/hide
Query:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNM---YYYPKYYGKV---TIFPAGTAIMAYQQPEAYLFYLKMNTVS
        W  WRK LKYKG+WV+EVQG M LVATVIATVTF A +NP GGVWQQDT  NSNN    YYY      +   TI PAGTAIMAY++P  YL Y   N VS
Subjt:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNM---YYYPKYYGKV---TIFPAGTAIMAYQQPEAYLFYLKMNTVS

Query:  FLASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE
        F+AS+ VI+LIIS++PLKN++CSW+L LAMC AV FLA  +L G  MV+L   ++
Subjt:  FLASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE

XP_022152683.1 ankyrin repeat-containing protein BDA1-like [Momordica charantia]1.1e-4268.06Show/hide
Query:  VWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCN-SNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKMNTVSFLASLSV
        VWR + +YK  W +EVQG M LVATVIATVTF AAINPPGGVWQQDT+ N S++ ++Y       TIFPAG+AIMAY+  EA+L YL MNTVSFLAS SV
Subjt:  VWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCN-SNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKMNTVSFLASLSV

Query:  IVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLN
        I+LIIS+ PLKNKICSW+L L M  AVAFLA GYLLG ++VSLN
Subjt:  IVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLN

XP_022955455.1 uncharacterized protein LOC111457477 isoform X1 [Cucurbita moschata]2.8e-4160Show/hide
Query:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNM---YYYPKYYGKV---TIFPAGTAIMAYQQPEAYLFYLKMNTVS
        W  WRK LKYKG+WV+EV+G M LVATVIATVTF A +NP GGVWQQDT  NSNN    YYY      +   TI PAG+AIMAY++P  YL Y   N VS
Subjt:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNM---YYYPKYYGKV---TIFPAGTAIMAYQQPEAYLFYLKMNTVS

Query:  FLASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE
        F+AS+ VI+LIIS++PLKN++CSWVL LAMC AV FLA  +L G  MV+L   ++
Subjt:  FLASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE

XP_022980639.1 ankyrin repeat-containing protein NPR4-like isoform X1 [Cucurbita maxima]1.3e-4161.69Show/hide
Query:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKV-----TIFPAGTAIMAYQQPEAYLFYLKMNTVSF
        W  WRK LKYKG+WV+EVQG M LVATVIATVTF A +NP GGVWQQDT  NSNN Y +  YY        TI PAG+AIMAY++P  YL Y   N VSF
Subjt:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKV-----TIFPAGTAIMAYQQPEAYLFYLKMNTVSF

Query:  LASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE
        +AS+SVI+LIIS++PLKN++CSWVL LAMC AV FLA  +L G  MV+L    +
Subjt:  LASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE

XP_022980640.1 ankyrin repeat-containing protein NPR4-like isoform X2 [Cucurbita maxima]1.3e-4161.69Show/hide
Query:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKV-----TIFPAGTAIMAYQQPEAYLFYLKMNTVSF
        W  WRK LKYKG+WV+EVQG M LVATVIATVTF A +NP GGVWQQDT  NSNN Y +  YY        TI PAG+AIMAY++P  YL Y   N VSF
Subjt:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKV-----TIFPAGTAIMAYQQPEAYLFYLKMNTVSF

Query:  LASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE
        +AS+SVI+LIIS++PLKN++CSWVL LAMC AV FLA  +L G  MV+L    +
Subjt:  LASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE

TrEMBL top hitse value%identityAlignment
A0A6J1DFI1 ankyrin repeat-containing protein BDA1-like5.5e-4368.06Show/hide
Query:  VWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCN-SNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKMNTVSFLASLSV
        VWR + +YK  W +EVQG M LVATVIATVTF AAINPPGGVWQQDT+ N S++ ++Y       TIFPAG+AIMAY+  EA+L YL MNTVSFLAS SV
Subjt:  VWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCN-SNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKMNTVSFLASLSV

Query:  IVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLN
        I+LIIS+ PLKNKICSW+L L M  AVAFLA GYLLG ++VSLN
Subjt:  IVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLN

A0A6J1GTP7 uncharacterized protein LOC111457477 isoform X21.4e-4160Show/hide
Query:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNM---YYYPKYYGKV---TIFPAGTAIMAYQQPEAYLFYLKMNTVS
        W  WRK LKYKG+WV+EV+G M LVATVIATVTF A +NP GGVWQQDT  NSNN    YYY      +   TI PAG+AIMAY++P  YL Y   N VS
Subjt:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNM---YYYPKYYGKV---TIFPAGTAIMAYQQPEAYLFYLKMNTVS

Query:  FLASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE
        F+AS+ VI+LIIS++PLKN++CSWVL LAMC AV FLA  +L G  MV+L   ++
Subjt:  FLASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE

A0A6J1GWC0 ankyrin repeat-containing protein At5g02620-like isoform X41.4e-4160Show/hide
Query:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNM---YYYPKYYGKV---TIFPAGTAIMAYQQPEAYLFYLKMNTVS
        W  WRK LKYKG+WV+EV+G M LVATVIATVTF A +NP GGVWQQDT  NSNN    YYY      +   TI PAG+AIMAY++P  YL Y   N VS
Subjt:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNM---YYYPKYYGKV---TIFPAGTAIMAYQQPEAYLFYLKMNTVS

Query:  FLASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE
        F+AS+ VI+LIIS++PLKN++CSWVL LAMC AV FLA  +L G  MV+L   ++
Subjt:  FLASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE

A0A6J1IX06 ankyrin repeat-containing protein NPR4-like isoform X26.1e-4261.69Show/hide
Query:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKV-----TIFPAGTAIMAYQQPEAYLFYLKMNTVSF
        W  WRK LKYKG+WV+EVQG M LVATVIATVTF A +NP GGVWQQDT  NSNN Y +  YY        TI PAG+AIMAY++P  YL Y   N VSF
Subjt:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKV-----TIFPAGTAIMAYQQPEAYLFYLKMNTVSF

Query:  LASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE
        +AS+SVI+LIIS++PLKN++CSWVL LAMC AV FLA  +L G  MV+L    +
Subjt:  LASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE

A0A6J1IZU6 ankyrin repeat-containing protein NPR4-like isoform X16.1e-4261.69Show/hide
Query:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKV-----TIFPAGTAIMAYQQPEAYLFYLKMNTVSF
        W  WRK LKYKG+WV+EVQG M LVATVIATVTF A +NP GGVWQQDT  NSNN Y +  YY        TI PAG+AIMAY++P  YL Y   N VSF
Subjt:  WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKV-----TIFPAGTAIMAYQQPEAYLFYLKMNTVSF

Query:  LASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE
        +AS+SVI+LIIS++PLKN++CSWVL LAMC AV FLA  +L G  MV+L    +
Subjt:  LASLSVIVLIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13950.1 unknown protein1.7e-1534.53Show/hide
Query:  KNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKVTIFPAGTAIMAYQQPE--AYLFYLKMNTVSFLASLSVIV
        K LK +G+W+ + +G + + ATVIA ++F   +NPPGGVWQ D     N     P   G+     AGTA++ Y+  +  AY+  +  +TVSF  S+S+I+
Subjt:  KNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKVTIFPAGTAIMAYQQPE--AYLFYLKMNTVSFLASLSVIV

Query:  LIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMV
        L+IS + L+N++   +L   M  AV  ++  +   + +V
Subjt:  LIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMV

AT4G13266.1 unknown protein8.5e-1230.94Show/hide
Query:  LKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQ-QDTQCNSNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKM---NTVSFLASLSVIV
        L ++G+W+ + +G + + ATVIA ++F   +NPPGGVWQ +D        +      GK+     GT+I+ +  P   +FYL M   N VSF AS+ +I 
Subjt:  LKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQ-QDTQCNSNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKM---NTVSFLASLSVIV

Query:  LIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMV
        L+I     +N++   ++ + M  AV  ++  +     +V
Subjt:  LIISQLPLKNKICSWVLALAMCTAVAFLAFGYLLGVQMV

AT5G50140.1 Ankyrin repeat family protein1.7e-0425.74Show/hide
Query:  KNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKMNTVSFLASLSVIVLI
        K  + +   ++  +  +T+VA +IA+VTF   +NPPGGV+Q               + GK T   AG  +       A+  +   N+++   SL +++L+
Subjt:  KNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKMNTVSFLASLSVIVLI

Query:  ISQLPLKNKICSWVLALA---MCTAVAFLAFGYLLG
        +S +P + K     L +    +  AV  +A  Y+ G
Subjt:  ISQLPLKNKICSWVLALA---MCTAVAFLAFGYLLG

AT5G51160.1 Ankyrin repeat family protein4.1e-0628.35Show/hide
Query:  EVQGAMTLVATVIATVTFHAAINPPGGVWQQD---------TQCNSNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKMNTVSFLASLSVIVLIIS
        E + A+ +VA+++AT TF A++ PPGG WQ           T  N+ N   +           AG +IM      A+  ++  NT+ F  SLS++ ++  
Subjt:  EVQGAMTLVATVIATVTFHAAINPPGGVWQQD---------TQCNSNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKMNTVSFLASLSVIVLIIS

Query:  QLPLK--NKICSWVLALAMCTAVAFLA
          PL+   +IC   +  +  T +A +A
Subjt:  QLPLK--NKICSWVLALAMCTAVAFLA

AT5G54700.1 Ankyrin repeat family protein1.2e-0527.2Show/hide
Query:  VREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKMNTVSFLASLSVIVLIISQLPLKNK
        ++  +  +T+VA +IA+VTF   +NPPGG++Q+ T                      G ++ A  +  A+  +   N+++   SL +++L++S +P K K
Subjt:  VREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKMNTVSFLASLSVIVLIISQLPLKNK

Query:  ICSWVLALA---MCTAVAFLAFGYL
            VL +    M  +VA LA  Y+
Subjt:  ICSWVLALA---MCTAVAFLAFGYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAATGTGTGGAGGAAGAATCTGAAGTACAAAGGGAACTGGGTTCGAGAAGTACAAGGCGCAATGACGCTGGTGGCTACGGTGATCGCGACCGTGACGTTTCATGCTGC
AATCAACCCTCCGGGCGGCGTTTGGCAACAAGACACTCAATGCAATTCAAACAACATGTATTATTATCCCAAATATTATGGCAAGGTGACAATTTTCCCAGCTGGAACTG
CGATAATGGCATACCAGCAACCTGAAGCTTACTTGTTTTACTTGAAGATGAACACAGTGTCATTCCTGGCATCATTGAGCGTGATTGTGTTGATCATCAGCCAGCTTCCG
CTCAAAAATAAGATTTGTAGTTGGGTGTTGGCATTGGCCATGTGCACGGCGGTGGCGTTCTTAGCATTTGGGTATCTACTAGGAGTTCAAATGGTTAGCCTCAACTCATT
TTCCGAA
mRNA sequenceShow/hide mRNA sequence
TGGAATGTGTGGAGGAAGAATCTGAAGTACAAAGGGAACTGGGTTCGAGAAGTACAAGGCGCAATGACGCTGGTGGCTACGGTGATCGCGACCGTGACGTTTCATGCTGC
AATCAACCCTCCGGGCGGCGTTTGGCAACAAGACACTCAATGCAATTCAAACAACATGTATTATTATCCCAAATATTATGGCAAGGTGACAATTTTCCCAGCTGGAACTG
CGATAATGGCATACCAGCAACCTGAAGCTTACTTGTTTTACTTGAAGATGAACACAGTGTCATTCCTGGCATCATTGAGCGTGATTGTGTTGATCATCAGCCAGCTTCCG
CTCAAAAATAAGATTTGTAGTTGGGTGTTGGCATTGGCCATGTGCACGGCGGTGGCGTTCTTAGCATTTGGGTATCTACTAGGAGTTCAAATGGTTAGCCTCAACTCATT
TTCCGAA
Protein sequenceShow/hide protein sequence
WNVWRKNLKYKGNWVREVQGAMTLVATVIATVTFHAAINPPGGVWQQDTQCNSNNMYYYPKYYGKVTIFPAGTAIMAYQQPEAYLFYLKMNTVSFLASLSVIVLIISQLP
LKNKICSWVLALAMCTAVAFLAFGYLLGVQMVSLNSFSE